RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FAM83EQ2M2I3 478 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF528Q3MIS6 628 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 CMPK2Q5EBM0 449 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TCHHL1Q5QJ38 904 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ACER2Q5QJU3 275 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 UTF1Q5T230 341 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ARMC12Q5T9G4 340 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 FAM219BQ5XKK7 198 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PTRHD1Q6GMV3 140 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PMF1Q6P1K2 205 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 DPY19L2P2Q6ZN68 376 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 EFL1Q7Z2Z2 1120 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ADAMTSL2Q86TH1 951 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 BIVMQ86UB2 503 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 STX12Q86Y82 276 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 RNF10Q8N5U6 811 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MLKLQ8NB16 471 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ZPLD1Q8TCW7 415 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PAQR8Q8TEZ7 354 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 CCDC12Q8WUD4 166 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 RLN3Q8WXF3 142 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 STARD8Q92502 1023 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TMEM45BQ96B21 275 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 CCDC51Q96ER9 411 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ZBED3Q96IU2 234 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 TRNT1Q96Q11 434 aaKnown RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MCCC1Q96RQ3 725 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 GPR61Q9BZJ8 451 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 LRRC19Q9H756 370 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ECT2Q9H8V3 914 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 SPACA1Q9HBV2 294 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ETNK2Q9NVF9 386 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 SMPD3Q9NY59 655 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 ARMCX1Q9P291 453 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 RCOR3Q9P2K3 495 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MIOXQ9UGB7 285 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 IKZF3Q9UKT9 509 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 DNPEPQ9ULA0 475 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 PLEKHA6Q9Y2H5 1048 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 MAB21L2Q9Y586 359 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 SIGLEC1Q9BZZ2 1709 aa2.79□□□□□ -1.96
VPS13B-207ENST00000518569 IGLV3-10A0A075B6K4 115 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TRAV6A0A075B6T7 132 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 A0A1B0GTQ1 180 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 A0A1B0GUA9 196 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 A0A1W2PQ72 361 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TUBAL3A6NHL2 446 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF716A6NP11 495 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 POLR1CO15160 346 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TBX19O60806 448 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 SURF6O75683 361 aaKnown RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 KLHL2O95198 593 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 GNA14O95837 355 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 LGI1O95970 557 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 IGHV3-9P01782 118 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 HOXB7P09629 217 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF735P0CB33 412 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ZCCHC18P0CG32 403 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 PRKACAP17612 351 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 IGFBP5P24593 272 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 NMT1P30419 496 aaKnown RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 RRM2P31350 389 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 HTR2BP41595 481 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 SYKP43405 635 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 OR1G1P47890 313 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 CEBPDP49716 269 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 SGSHP51688 502 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 CCNHP51946 323 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 RWDD2BP57060 319 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 NME3Q13232 169 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 GNA13Q14344 377 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 AANATQ16613 207 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 PPP1R3AQ16821 1122 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ZSWIM7Q19AV6 140 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 KLHL40Q2TBA0 621 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TIMM50Q3ZCQ8 353 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 SLC36A3Q495N2 470 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ACSF3Q4G176 576 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 HSP90AA4PQ58FG1 418 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 CARD17Q5XLA6 110 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TPGS1Q6ZTW0 290 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TPRA1Q86W33 373 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 AMZ2Q86W34 360 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 COMMD1Q8N668 190 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 LRRC17Q8N6Y2 441 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 OR9A1PQ8NGU1 263 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF671Q8TAW3 534 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 MITD1Q8WV92 249 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TSEN15Q8WW01 171 aaKnown RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 DLX4Q92988 240 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 MCUR1Q96AQ8 359 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ISG20Q96AZ6 181 aaKnown RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 CHMP6Q96FZ7 201 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 C9orf85Q96MD7 179 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 SPATA13Q96N96 652 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 DEFB118Q96PH6 123 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 KCNS3Q9BQ31 491 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 ZSCAN5AQ9BUG6 496 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 NLNQ9BYT8 704 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TMEM117Q9H0C3 514 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms