RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 EIF4EP06730 217 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 UBBP0CG47 229 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 UBCP0CG48 685 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TIMP2P16035 220 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 VEGFCP49767 419 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RAG2P55895 527 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RPS27AP62979 156 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 UBA52P62987 128 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RAB33AQ14088 237 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TBC1D3GQ6DHY5 549 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ADGRG3Q86Y34 549 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SLC35F2Q8IXU6 374 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 KLHDC8AQ8IYD2 350 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RNF113BQ8IZP6 322 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 OR5AR1Q8NGP9 310 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 STOML3Q8TAV4 291 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SMAP2Q8WU79 429 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 FOXJ1Q92949 421 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RELTQ969Z4 430 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 EID2BQ96D98 161 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF578Q96N58 590 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 MS4A4EQ96PG1 132 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SDHCQ99643 169 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 EPHX3Q9H6B9 360 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ERVMER34-1Q9H9K5 563 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 LRFN1Q9P244 771 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 MRPS33Q9Y291 106 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 LSM2Q9Y333 95 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 BRWD3Q6RI45 1802 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 C5orf51A6NDU8 294 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 F5H0A9 414 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ADAM12O43184 909 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RLN2P04090 185 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 UGT2B7P16662 529 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 CD22P20273 847 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SOX18P35713 384 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SOX2P48431 317 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 CDK5Q00535 292 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 B4GALNT1Q00973 533 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 PRKCZQ05513 592 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ILF3Q12906 894 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SMCO1Q147U7 214 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 PCGF3Q3KNV8 242 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 LY6G5CQ5SRR4 150 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RPL22L1Q6P5R6 122 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 KIAA1324Q6UXG2 1013 aaKnown RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TAS1R1Q7RTX1 841 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 WDR53Q7Z5U6 358 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF366Q8N895 744 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF454Q8N9F8 522 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF740Q8NDX6 193 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 OR52E2Q8NGJ4 325 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 WFDC5Q8TCV5 224 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 HAVCR2Q8TDQ0 301 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 AUTS2Q8WXX7 1259 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 PHYHIPQ92561 330 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 GHSRQ92847 366 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SLC22A18Q96BI1 424 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 DDOQ99489 341 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 IFT46Q9NQC8 304 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SPHK2Q9NRA0 654 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 GPR34Q9UPC5 381 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SLC35A3Q9Y2D2 325 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 IGLV3-16A0A075B6K0 115 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 A0A1B0GVT2 93 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 A8MUA0 341 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SULT1B1O43704 296 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ADAMTS4O75173 837 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 PPM1BO75688 479 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 PPP1R3DO95685 299 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ATP1B1P05026 303 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ASGR2P07307 311 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 UBL4AP11441 157 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 RAB3AP20336 220 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ZP3P21754 424 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 AK4P27144 223 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLC6A1P30531 599 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 PRKAR1BP31321 381 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 MC3RP41968 323 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 RPL35P42766 123 aaKnown RBP6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ACTBP60709 375 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ACTG1P63261 375 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 MC2RQ01718 297 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SCGB2B2Q4G0G5 96 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLC25A30Q5SVS4 291 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ELP2Q6IA86 826 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 LIPIQ6XZB0 460 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ABHD13Q7L211 337 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 IFNL1Q8IU54 200 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 TCEAL8Q8IYN2 117 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 CHST4Q8NCG5 386 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 OR2L2Q8NH16 312 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SYNPRQ8TBG9 265 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 MARVELD3Q96A59 401 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 SLX1AQ9BQ83 275 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 KXD1Q9BQD3 176 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 ABCG4Q9H172 646 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 BCL2L10Q9HD36 194 aa6.22□□□□□ -1.41
CPNE3-203ENST00000517490 NRIP3Q9NQ35 241 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms