RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SLC25A53Q5H9E4 307 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 CBLN3Q6UW01 205 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 LRRC74BQ6ZQY2 392 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 ESPNLQ6ZVH7 1005 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 EIF3MQ7L2H7 374 aaKnown RBP11.51□□□□□ -0.57
CLCN3-210ENST00000515420 GGNQ86UU5 652 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 CMIPQ8IY22 773 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 UBQLNLQ8IYU4 475 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 GPR119Q8TDV5 335 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 RAB8BQ92930 207 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 MRGPRX4Q96LA9 322 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 RNF145Q96MT1 663 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 PINK1Q9BXM7 581 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 LAT2Q9GZY6 243 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 PIGMQ9H3S5 423 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 RAD21L1Q9H4I0 556 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 RABEP2Q9H5N1 569 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 KCNN3Q9UGI6 736 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 MKLN1Q9UL63 735 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 CARD8Q9Y2G2 431 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 APCP25054 2843 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
CLCN3-210ENST00000515420 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ADAMDEC1O15204 470 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 SEC14L5O43304 696 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 GMFGO60234 142 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 H6PDO95479 791 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 NTN1O95631 604 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 NUDT14O95848 222 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 CSTAP01040 98 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 SNRPB2P08579 225 aaKnown RBP11.5□□□□□ -0.57
CLCN3-210ENST00000515420 PRF1P14222 555 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 PCYT1AP49585 367 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 MVDP53602 400 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 CASP9P55211 416 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 CLDN20P56880 219 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 SQLEQ14534 574 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 CTU2Q2VPK5 515 aaKnown RBP11.5□□□□□ -0.57
CLCN3-210ENST00000515420 GPAT3Q53EU6 434 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 PDSS1Q5T2R2 415 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 BLOC1S3Q6QNY0 202 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 P4HA3Q7Z4N8 544 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF295-AS1Q8N0V1 137 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ARFGAP2Q8N6H7 521 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 OR5M1Q8NGP8 315 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 POC1BQ8TC44 478 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ST8SIA1Q92185 356 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 GTF2H4Q92759 462 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
CLCN3-210ENST00000515420 VPS33AQ96AX1 596 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ADGRG7Q96K78 797 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 RNF122Q9H9V4 155 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 TPT1P8Q9HAU6 139 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
CLCN3-210ENST00000515420 SLC6A13Q9NSD5 602 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF446Q9NWS9 450 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 CALML5Q9NZT1 146 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 PRDM4Q9UKN5 801 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 GMEB1Q9Y692 573 aa11.5□□□□□ -0.57
CLCN3-210ENST00000515420 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 FBN2P35556 2912 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 A0A096LPI6 279 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 CENPVL1A0A0U1RR11 272 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 PRAMEF27A3QJZ7 478 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 GJE1A6NN92 205 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 H0YC42 278 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 EIF1AYO14602 144 aaKnown RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 OIP5O43482 229 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 TGM6O95932 706 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 GSNP06396 782 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 PRKCAP17252 672 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 HOXB9P17482 250 aaPredicted RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 PGCP20142 388 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 RPS4Y1P22090 263 aaKnown RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 PGM1P36871 562 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 TPD52P55327 224 aaPredicted RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 DLX5P56178 289 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 KCNJ10P78508 379 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 SORDQ00796 357 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 FOXF1Q12946 379 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 FADDQ13158 208 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 GNA13Q14344 377 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 PON3Q15166 354 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 COX20Q5RI15 118 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 C6orf10Q5SRN2 563 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 DNAJC14Q6Y2X3 702 aaPredicted RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 KIF18BQ86Y91 864 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 FUNDC1Q8IVP5 155 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 TMCO5AQ8N6Q1 288 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 SMPDL3BQ92485 455 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 INTS12Q96CB8 462 aaKnown RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 SPDL1Q96EA4 605 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 NPAS1Q99742 590 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 SLC38A1Q9H2H9 487 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 MTHFD2LQ9H903 347 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms