RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 C17orf50Q8WW18 174 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 FBXO32Q969P5 355 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 MRPL38Q96DV4 380 aaKnown RBP3.83□□□□□ -1.8
CHD1-209ENST00000512844 FAM122AQ96E09 287 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 CCDC51Q96ER9 411 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 SIKE1Q9BRV8 207 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 RAB33BQ9H082 229 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 IQCGQ9H095 443 aaKnown RBP3.83□□□□□ -1.8
CHD1-209ENST00000512844 VCX2Q9H322 139 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 EXO5Q9H790 373 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 LZTFL1Q9NQ48 299 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 DUS2Q9NX74 493 aaKnown RBP3.83□□□□□ -1.8
CHD1-209ENST00000512844 SMPD3Q9NY59 655 aaPredicted RBP3.83□□□□□ -1.8
CHD1-209ENST00000512844 DNPEPQ9ULA0 475 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 ABCG2Q9UNQ0 655 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 CHMP2BQ9UQN3 213 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 PLEKHG2Q9H7P9 1386 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 NPC1L1Q9UHC9 1359 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 PTPRUQ92729 1446 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 CUX1P39880 1505 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 HMGXB3Q12766 1538 aa3.83□□□□□ -1.8
CHD1-209ENST00000512844 MAPKBP1O60336 1514 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 AQRO60306 1485 aaKnown RBP eCLIP3.82□□□□□ -1.84e-7■■■■■ 27.6
CHD1-209ENST00000512844 CCDC18Q5T9S5 1454 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 LRRC9Q6ZRR7 1453 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 FYCO1Q9BQS8 1478 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 FMN1Q68DA7 1419 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 DHX29Q7Z478 1369 aaKnown RBP3.82□□□□□ -1.8
CHD1-209ENST00000512844 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 A0A075B6Q4 140 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 TMEM89A2RUT3 159 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.82□□□□□ -1.8
CHD1-209ENST00000512844 TBX19O60806 448 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 SERF1AO75920 110 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 STK17BO94768 372 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 PGK2P07205 417 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 P0C879 139 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 IL2RGP31785 369 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 UGT1A3P35503 534 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 SLC6A8P48029 635 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 STX17P56962 302 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 MAP3K7CLP57077 242 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 TRDNQ13061 729 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 ARHGAP19Q14CB8 494 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 CEBPEQ15744 281 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 AP1ARQ63HQ0 302 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 PMF1Q6P1K2 205 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 MOB1BQ7L9L4 216 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 PARGQ86W56 976 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 BHLHE23Q8NDY6 225 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 OR52E1Q8NGJ3 308 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 RLN3Q8WXF3 142 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 LRRC39Q96DD0 335 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 VSIG2Q96IQ7 327 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 IFT74Q96LB3 600 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 ZNF396Q96N95 335 aaPredicted RBP3.82□□□□□ -1.8
CHD1-209ENST00000512844 SPATA13Q96N96 652 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 LZTS2Q9BRK4 669 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 ZSCAN5AQ9BUG6 496 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 FICDQ9BVA6 458 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 TSSK1BQ9BXA7 367 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 CRNKL1Q9BZJ0 848 aaKnown RBP3.82□□□□□ -1.8
CHD1-209ENST00000512844 SLC7A5P2Q9GIP4 190 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 STARD5Q9NSY2 213 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 GHRLQ9UBU3 117 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 PDE10AQ9Y233 779 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 MAB21L2Q9Y586 359 aa3.82□□□□□ -1.8
CHD1-209ENST00000512844 CFAP43Q8NDM7 1665 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 UACAQ9BZF9 1416 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 A0A0U1RQS6 177 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 A0A0U1RRA0 63 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 PCP4L1A6NKN8 68 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 ZFP92A6NM28 416 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 ZNF879B4DU55 563 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 H3BMH7 237 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 GOLGA8SH3BPF8 625 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 TRIM3O75382 744 aaPredicted RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 NOL4O94818 638 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 S100A6P06703 90 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 FGF4P08620 206 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 STAG3L3P0CL85 134 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 RALBP11234 206 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 CD1EP15812 388 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 PSMB1P20618 241 aaKnown RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 BMI1P35226 326 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 EMDP50402 254 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 RPS8P62241 208 aaKnown RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 SNTB2Q13425 540 aaKnown RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 PDK3Q15120 406 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 SSX2Q16385 188 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 CCDC57Q2TAC2 916 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 ACSF3Q4G176 576 aaPredicted RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 C2orf83Q53S99 150 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 C9orf129Q5T035 196 aaKnown RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 PRAMEF20Q5VT98 475 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 SLX4IPQ5VYV7 408 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 TFAP2EQ6VUC0 442 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 WDR88Q6ZMY6 472 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms