RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 OR4D5Q8NGN0 318 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 ERGIC1Q969X5 290 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 NTAN1Q96AB6 310 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 TIMD4Q96H15 378 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 RNF170Q96K19 258 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 CCDC42Q96M95 316 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM209Q96SK2 561 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 GPHA2Q96T91 129 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 UTP23Q9BRU9 249 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC22A4Q9H015 551 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 TXNRD2Q9NNW7 524 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 C19orf12Q9NSK7 152 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 DCAF13Q9NV06 445 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 INTS9Q9NV88 658 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 MAN1B1Q9UKM7 699 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 RAB23Q9ULC3 237 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 TAF6LQ9Y6J9 622 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 A0A1W2PNV4 684 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR2AT4A6NND4 320 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 SRRM4A7MD48 611 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 E5RGE8 158 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 OCMP0CE72 109 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 CHRNB1P11230 501 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 BCKDHBP21953 392 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 MPIP34949 423 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 NBL1P41271 181 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 RAP1GDS1P52306 607 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 RABGGTBP53611 331 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 PLA2G16P53816 162 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 RRADP55042 308 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 ELLP55199 621 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 RAD51Q06609 339 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 C1orf61Q13536 156 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 TPBGQ13641 420 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 TFDP1Q14186 410 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 CRMP1Q14194 572 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 DCAF4L1Q3SXM0 396 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 HACD4Q5VWC8 232 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 PAPD7Q5XG87 772 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 SPESP1Q6UW49 350 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 CD300LDQ6UXZ3 194 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 SYT12Q8IV01 421 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 SPAG16Q8N0X2 631 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 APH1AQ96BI3 265 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 MTERF3Q96E29 417 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM84BQ96KN1 310 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 DLL4Q9NR61 685 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 ECHDC1Q9NTX5 307 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 GPR83Q9NYM4 423 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 PRG3Q9Y2Y8 225 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 NSG2Q9Y328 171 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 DHRS7Q9Y394 339 aa5.71□□□□□ -1.5
TRAPPC11-209ENST00000512476 LAMB2P55268 1798 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 TRBV11-1A0A0K0K1C0 115 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 A1L4Q6 167 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 C5orf60A6NFR6 353 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 F5H697 171 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 F8VVB4 439 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 F8VWA3 439 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 IFNA5P01569 189 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 GSTT2P0CG29 244 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 GSTT2BP0CG30 244 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 CREB1P16220 341 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 GLRA1P23415 457 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 HOXA7P31268 230 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 RBM34P42696 430 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 CXADRP78310 365 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 PNRC1Q12796 327 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 STX4Q12846 297 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 CDSNQ15517 529 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZSWIM7Q19AV6 140 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 PHLDA2Q53GA4 152 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 MIIPQ5JXC2 388 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 FFAR4Q5NUL3 377 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 APOBEC3HQ6NTF7 200 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC25A47Q6Q0C1 308 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 Q6ZSR3 168 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM92BQ6ZTR7 304 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ABHD13Q7L211 337 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 GPR141Q7Z602 305 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 TP53INP2Q8IXH6 220 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM126BQ8IXS8 530 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 RELL2Q8NC24 303 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 GCDHQ92947 438 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 IFT27Q9BW83 186 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 NDRG2Q9UN36 371 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 MMACHCQ9Y4U1 282 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 C4AP0C0L4 1744 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 DDX60Q8IY21 1712 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 MYH3P11055 1940 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ETHE1O95571 254 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 VTNP04004 478 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 NR3C1P04150 777 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 SMIM10L1P0DMW3 83 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 HMGB2P26583 209 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 CTSCP53634 463 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms