RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CHI3L2Q15782 390 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 PDK4Q16654 411 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 PRICKLE4Q2TBC4 344 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 TRMT12Q53H54 448 aaKnown RBP8.01□□□□□ -1.13
NUP54-211ENST00000512151 FBLN7Q53RD9 439 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 OR52E8Q6IFG1 317 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 LAS2Q8IYD9 372 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 CCNYL1Q8N7R7 359 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 ZDHHC22Q8N966 263 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 OR7G3Q8NG95 312 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 TRPC4APQ8TEL6 797 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 ABHD3Q8WU67 409 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 RGMAQ96B86 450 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 CCDC126Q96EE4 140 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 C1GALT1C1Q96EU7 318 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 CMTM7Q96FZ5 175 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 CCT8L2Q96SF2 557 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 EFCAB11Q9BUY7 163 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 FAM107BQ9H098 131 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 IPPKQ9H8X2 491 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 GLRX2Q9NS18 164 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 NKIRAS1Q9NYS0 192 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 POU2F3Q9UKI9 436 aa8.01□□□□□ -1.13
NUP54-211ENST00000512151 GPR55Q9Y2T6 319 aaPredicted RBP8.01□□□□□ -1.13
NUP54-211ENST00000512151 HEATR1Q9H583 2144 aaKnown RBP8.01□□□□□ -1.13
NUP54-211ENST00000512151 NPIPA5A0A0B4J1W7 369 aa8□□□□□ -1.13
NUP54-211ENST00000512151 A0A0J9YW62 118 aa8□□□□□ -1.13
NUP54-211ENST00000512151 NPIPA7E9PJI5 369 aa8□□□□□ -1.13
NUP54-211ENST00000512151 TNFSF11O14788 317 aa8□□□□□ -1.13
NUP54-211ENST00000512151 NPHS1O60500 1241 aa8□□□□□ -1.13
NUP54-211ENST00000512151 OR4F21O95013 312 aa8□□□□□ -1.13
NUP54-211ENST00000512151 CHRNGP07510 517 aa8□□□□□ -1.13
NUP54-211ENST00000512151 TACSTD2P09758 323 aa8□□□□□ -1.13
NUP54-211ENST00000512151 NPIPA8P0DM63 369 aa8□□□□□ -1.13
NUP54-211ENST00000512151 CD40P25942 277 aa8□□□□□ -1.13
NUP54-211ENST00000512151 PIK3R1P27986 724 aa8□□□□□ -1.13
NUP54-211ENST00000512151 LIMS1P48059 325 aa8□□□□□ -1.13
NUP54-211ENST00000512151 ZNF83P51522 516 aa8□□□□□ -1.13
NUP54-211ENST00000512151 RAP1GDS1P52306 607 aa8□□□□□ -1.13
NUP54-211ENST00000512151 SEC24CP53992 1094 aa8□□□□□ -1.13
NUP54-211ENST00000512151 FOXA1P55317 472 aa8□□□□□ -1.13
NUP54-211ENST00000512151 CORO7P57737 925 aa8□□□□□ -1.13
NUP54-211ENST00000512151 IRF8Q02556 426 aa8□□□□□ -1.13
NUP54-211ENST00000512151 BST1Q10588 318 aa8□□□□□ -1.13
NUP54-211ENST00000512151 TRAF3Q13114 568 aa8□□□□□ -1.13
NUP54-211ENST00000512151 DDX39BQ13838 428 aaKnown RBP8□□□□□ -1.13
NUP54-211ENST00000512151 LTB4RQ15722 352 aa8□□□□□ -1.13
NUP54-211ENST00000512151 SWI5Q1ZZU3 235 aa8□□□□□ -1.13
NUP54-211ENST00000512151 ZNF544Q6NX49 715 aa8□□□□□ -1.13
NUP54-211ENST00000512151 LETMD1Q6P1Q0 360 aa8□□□□□ -1.13
NUP54-211ENST00000512151 METTL2BQ6P1Q9 378 aaKnown RBP8□□□□□ -1.13
NUP54-211ENST00000512151 NPSR1Q6W5P4 371 aa8□□□□□ -1.13
NUP54-211ENST00000512151 C1orf229Q6ZS94 237 aaPredicted RBP8□□□□□ -1.13
NUP54-211ENST00000512151 FRMD7Q6ZUT3 714 aa8□□□□□ -1.13
NUP54-211ENST00000512151 LARP4Q71RC2 724 aaKnown RBP eCLIP8□□□□□ -1.13
NUP54-211ENST00000512151 TUSC5Q8IXB3 177 aa8□□□□□ -1.13
NUP54-211ENST00000512151 OR4F6Q8NGB9 312 aa8□□□□□ -1.13
NUP54-211ENST00000512151 OR52R1Q8NGF1 315 aa8□□□□□ -1.13
NUP54-211ENST00000512151 CKAP2Q8WWK9 683 aa8□□□□□ -1.13
NUP54-211ENST00000512151 ZNF75CPQ92670 426 aaPredicted RBP8□□□□□ -1.13
NUP54-211ENST00000512151 EFHD2Q96C19 240 aaPredicted RBP8□□□□□ -1.13
NUP54-211ENST00000512151 DTNBP1Q96EV8 351 aa8□□□□□ -1.13
NUP54-211ENST00000512151 RADILQ96JH8 1075 aa8□□□□□ -1.13
NUP54-211ENST00000512151 SNX18Q96RF0 628 aa8□□□□□ -1.13
NUP54-211ENST00000512151 KCNA7Q96RP8 456 aa8□□□□□ -1.13
NUP54-211ENST00000512151 SHCBP1LQ9BZQ2 653 aa8□□□□□ -1.13
NUP54-211ENST00000512151 BRINP2Q9C0B6 783 aa8□□□□□ -1.13
NUP54-211ENST00000512151 ANKRA2Q9H9E1 313 aa8□□□□□ -1.13
NUP54-211ENST00000512151 INTS9Q9NV88 658 aaKnown RBP8□□□□□ -1.13
NUP54-211ENST00000512151 LYARQ9NX58 379 aaKnown RBP8□□□□□ -1.13
NUP54-211ENST00000512151 PRSS50Q9UI38 385 aa8□□□□□ -1.13
NUP54-211ENST00000512151 ING1Q9UK53 422 aaPredicted RBP8□□□□□ -1.13
NUP54-211ENST00000512151 MCTS1Q9ULC4 181 aaKnown RBP8□□□□□ -1.13
NUP54-211ENST00000512151 RNF11Q9Y3C5 154 aa8□□□□□ -1.13
NUP54-211ENST00000512151 SPEF1Q9Y4P9 236 aa8□□□□□ -1.13
NUP54-211ENST00000512151 ANGPTL3Q9Y5C1 460 aa8□□□□□ -1.13
NUP54-211ENST00000512151 PMF1-BGLAPU3KQ54 211 aa8□□□□□ -1.13
NUP54-211ENST00000512151 A0A1W2PR80 420 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 ADAMDEC1O15204 470 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 GMFGO60234 142 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 FADS1O60427 444 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 SYNGR4O95473 234 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 STAMBPO95630 424 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 SERPINE1P05121 402 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 CT45A9P0DMV2 189 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 HKR1P10072 659 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 PORP16435 677 aaPredicted RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 PCSK2P16519 638 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 EVI2BP34910 448 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 PIK3CGP48736 1102 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 CHN2P52757 468 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 ABCE1P61221 599 aaKnown RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 STX3Q13277 289 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 LAPTM5Q13571 262 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 CCNIQ14094 377 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 EFR3AQ14156 821 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 GANABQ14697 944 aaKnown RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 TRIP10Q15642 601 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 TBCCQ15814 346 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms