RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZNF117Q03924 483 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 CLCQ05315 142 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 MST1LQ2TV78 715 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 UNC50Q53HI1 259 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 SPIN4Q56A73 249 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 CBLN3Q6UW01 205 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 C12orf54Q6X4T0 127 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 RFLNBQ8N5W9 214 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 B4GALNT2Q8NHY0 566 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 GIMAP5Q96F15 307 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 OTUB1Q96FW1 271 aaPredicted RBP16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 RADILQ96JH8 1075 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 FOXN4Q96NZ1 517 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 ESYT3A0FGR9 886 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 SMAD9O15198 467 aaKnown RBP16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 IGHV3-9P01782 118 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 KRT6AP02538 564 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 KRT6BP04259 564 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 DHRS4L1P0CG22 281 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 ELK4P28324 431 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 KRT6CP48668 564 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 CHRNEQ04844 493 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 CCNJQ5T5M9 372 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 TMEM108Q6UXF1 575 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 DEPDC4Q8N2C3 294 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 SLC16A11Q8NCK7 471 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 ZFP90Q8TF47 636 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 SORCS2Q96PQ0 1159 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 KCNA7Q96RP8 456 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 C1QTNF6Q9BXI9 259 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 ANKZF1Q9H8Y5 726 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 C3orf14Q9HBI5 128 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 TIGARQ9NQ88 270 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 MGAT4BQ9UQ53 548 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
HMGCS1-206ENST00000511774 FAM187AA6NFU0 413 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 ULK1O75385 1050 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 PTAFRP25105 342 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 NTSP30990 170 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF763Q0D2J5 394 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 RASA2Q15283 850 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 DUSP5Q16690 384 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF544Q6NX49 715 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 P2RY8Q86VZ1 359 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 SLC43A2Q8N370 569 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 METTL6Q8TCB7 284 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 INPP5KQ9BT40 448 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 SHCBP1LQ9BZQ2 653 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 C12orf65Q9H3J6 166 aaKnown RBP16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 SIRT5Q9NXA8 310 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 KLHL9Q9P2J3 617 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 GRID1Q9ULK0 1009 aa16.69■□□□□ 0.26
HMGCS1-206ENST00000511774 M0R1B8 84 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 VENTXO95231 258 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 PRPS2P11908 318 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 NTF4P34130 210 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 EIF1P41567 113 aaKnown RBP16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 PDLIM4P50479 330 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 RASGEF1BQ0VAM2 473 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 HSPB3Q12988 150 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 NDUFAF6Q330K2 333 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 ARL13AQ5H913 290 aaPredicted RBP16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 LSRQ86X29 649 aaPredicted RBP16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 TMEM237Q96Q45 408 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF382Q96SR6 550 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 MRPL57Q9BQC6 102 aaKnown RBP16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 MYNNQ9NPC7 610 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 MIEF1Q9NQG6 463 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 ICAM5Q9UMF0 924 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 TRAF6Q9Y4K3 522 aa16.68■□□□□ 0.26
HMGCS1-206ENST00000511774 NPIPA5A0A0B4J1W7 369 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 LRP5LA4QPB2 252 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 TTC36A6NLP5 189 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 NPIPA7E9PJI5 369 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 CYTIPO60759 359 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 H6PDO95479 791 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 NPIPA8P0DM63 369 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 HMOX2P30519 316 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 IL2RGP31785 369 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 RAC3P60763 192 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 SLC25A3Q00325 362 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 SWI5Q1ZZU3 235 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 EXOSC6Q5RKV6 272 aaKnown RBP16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF678Q5SXM1 525 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 ANKRD26P1Q6NSI1 321 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 GPRIN3Q6ZVF9 776 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 CIDECQ96AQ7 238 aaPredicted RBP16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 C16orf58Q96GQ5 468 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 EGLN2Q96KS0 407 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 PIMREGQ9BSJ6 248 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 UBQLN4Q9NRR5 601 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 POLR3HQ9Y535 204 aaPredicted RBP16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 ATP23Q9Y6H3 246 aa16.67■□□□□ 0.26
HMGCS1-206ENST00000511774 A0A1W2PQD3 144 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF23P17027 643 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 PRKCAP17252 672 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 PRKAG1P54619 331 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 FOXA1P55317 472 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms