RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MAJINQ3KP22 176 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 DCST2Q5T1A1 773 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ATAD3BQ5T9A4 648 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ATF7IP2Q5U623 682 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 FAM71F2Q6NXP2 309 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 FAM199XQ6PEV8 388 aaPredicted RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 KCNIP4Q6PIL6 250 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 PAMR1Q6UXH9 720 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 LRRC70Q7Z2Q7 622 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ACOT1Q86TX2 421 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 TMEM123Q8N131 208 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ANKFN1Q8N957 763 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 TFB1MQ8WVM0 346 aaKnown RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 SLC5A11Q8WWX8 675 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 BADQ92934 168 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 CELF6Q96J87 481 aaKnown RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 CYP2S1Q96SQ9 504 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 DPH7Q9BTV6 452 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 SLITRK2Q9H156 845 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 CAB39LQ9H9S4 337 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 WRAP73Q9P2S5 460 aaPredicted RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ZNF221Q9UK13 617 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ANGPTL2Q9UKU9 493 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 MEMO1Q9Y316 297 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 OARD1Q9Y530 152 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ATAD2BQ9ULI0 1458 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 LOC100131303A0A0U1RQF7 123 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 MBLAC1A4D2B0 266 aaPredicted RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 METTL21EPA6NDL7 271 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 GPR89AB7ZAQ6 455 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 MTX2O75431 263 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 GPR89BP0CG08 455 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 CALRP27797 417 aaKnown RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 LAP3P28838 519 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 NF2P35240 595 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 FNTAP49354 379 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 HLCSP50747 726 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 GBX2P52951 348 aaPredicted RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 HSPA2P54652 639 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 ACTR1AP61163 376 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 OC90Q02509 493 aaPredicted RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 RAB40BQ12829 278 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 IL24Q13007 206 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 GPM6BQ13491 265 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 NDUFA9Q16795 377 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 SBK1Q52WX2 424 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 TP53I3Q53FA7 332 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 CFAP157Q5JU67 520 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 SLC22A10Q63ZE4 541 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 CXCL17Q6UXB2 119 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 C2orf66Q6UXQ4 117 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 RGS9BPQ6ZS82 235 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 APTXQ7Z2E3 356 aaKnown RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 GPR137CQ8N3F9 429 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 CATSPER1Q8NEC5 780 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 STEAP2Q8NFT2 490 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 MRAPQ8TCY5 172 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 SH3YL1Q96HL8 342 aaPredicted RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 SENP8Q96LD8 212 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 SIGLEC12Q96PQ1 595 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 PSKH2Q96QS6 385 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 OR5B2Q96R09 309 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 CITED1Q99966 193 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 DEFB126Q9BYW3 111 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 GLT8D2Q9H1C3 349 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 PPDPFQ9H3Y8 114 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 SENP1Q9P0U3 644 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 RNF14Q9UBS8 474 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 SAMD4AQ9UPU9 718 aaKnown RBP2.32□□□□□ -2.04
CHD1-207ENST00000511628 PDE10AQ9Y233 779 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 MAB21L2Q9Y586 359 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 ALG6Q9Y672 507 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 FRMPD4Q14CM0 1322 aa2.32□□□□□ -2.04
CHD1-207ENST00000511628 VSTM2BA6NLU5 285 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 PP2D1A8MPX8 630 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 OR7A17O14581 309 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 MSH4O15457 936 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 MAGEB3O15480 346 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 SNNO75324 88 aaPredicted RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 ADCY5O95622 1261 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 PGK1P00558 417 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 ALOX5P09917 674 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 CYP2B6P20813 491 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 MMP11P24347 488 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 CD80P33681 288 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 P2RY1P47900 373 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 MRPS11P82912 194 aaKnown RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 NDPQ00604 133 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 SPIBQ01892 262 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 ELAVL3Q14576 367 aaKnown RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 TATDN3Q17R31 274 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 GSG1Q2KHT4 349 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 PRR30Q53SZ7 412 aaPredicted RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 FAHD2BQ6P2I3 314 aaPredicted RBP2.31□□□□□ -2.04
CHD1-207ENST00000511628 CASC1Q6TDU7 716 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 ZNF677Q86XU0 584 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 VSTM4Q8IW00 320 aa2.31□□□□□ -2.04
CHD1-207ENST00000511628 ZNF683Q8IZ20 524 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms