RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CLSPNQ9HAW4 1339 aa3.37□□□□□ -1.87
TOPBP1-206ENST00000508524 LRRK2Q5S007 2527 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ARID1AO14497 2285 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 MICAL3Q7RTP6 2002 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 SETD2Q9BYW2 2564 aaPredicted RBP3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 PINLYPA6NC86 204 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 H0Y626 953 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 FLOT1O75955 427 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 IGHV3-23P01764 117 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 CXCL10P02778 98 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 IGKV3-11P04433 115 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNF17P17021 662 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 PSMB1P20618 241 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 IGHV1-2P23083 117 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ACADSBP45954 432 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 CNTN2Q02246 1040 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 N4BP2L1Q5TBK1 243 aaPredicted RBP3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ARMCX2Q7L311 632 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 PRSS42Q7Z5A4 293 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ERICH1Q86X53 443 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNF184Q99676 751 aaPredicted RBP3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 ANGPTL2Q9UKU9 493 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 FLVCR1Q9Y5Y0 555 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 NLRC5Q86WI3 1866 aa3.36□□□□□ -1.87
TOPBP1-206ENST00000508524 CENPEQ02224 2701 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 FOCADQ5VW36 1801 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 A0A1B0GUL7 405 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 CACNB4O00305 520 aaPredicted RBP3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 CABYRO75952 493 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 SFTPBP07988 381 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 SERPINF2P08697 491 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 UROSP10746 265 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 GLULP15104 373 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 CTNNB1P35222 781 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 RFC2P35250 354 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 POU3F4P49335 361 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 DIO3P55073 304 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 DYNLL1P63167 89 aaKnown RBP3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 FUT11Q495W5 492 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 SBK1Q52WX2 424 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 MYOCDQ8IZQ8 938 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 OR4A16Q8NH70 328 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 P3H4Q92791 437 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 LHX4Q969G2 390 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 RAB39BQ96DA2 213 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 ACCSQ96QU6 501 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 GRPEL1Q9HAV7 217 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 AATFQ9NY61 560 aaKnown RBP eCLIP3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 HOXC10Q9NYD6 342 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 HMG20BQ9P0W2 317 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 VPS54Q9P1Q0 977 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 CTNNA3Q9UI47 895 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 KLHDC2Q9Y2U9 406 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 CACNA1EQ15878 2313 aa3.35□□□□□ -1.87
TOPBP1-206ENST00000508524 LCTP09848 1927 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 ITPR2Q14571 2701 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNF320A2RRD8 509 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 C5orf67F2Z3F1 127 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 EI24O14681 340 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 EMC8O43402 210 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 SLC25A27O95847 323 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 MMP1P03956 469 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 NR2C1P13056 603 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 SMSP52788 366 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 SMC1AQ14683 1233 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 DCAF4L1Q3SXM0 396 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 FAM133BQ5BKY9 247 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 CHCHD4Q8N4Q1 142 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 FAM104AQ969W3 186 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 GPR137Q96N19 417 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 OSBPL8Q9BZF1 889 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 POMKQ9H5K3 350 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 ZWILCHQ9H900 591 aa3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 MRPS2Q9Y399 296 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-206ENST00000508524 SDK1Q7Z5N4 2213 aa3.34□□□□□ -1.88
TOPBP1-206ENST00000508524 ACACAQ13085 2346 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 RAI1Q7Z5J4 1906 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 NACAE9PAV3 2078 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 PDLIM1O00151 329 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 SLC28A1O00337 649 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 SLC7A4O43246 635 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 PRB1P04280 392 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 DCNP07585 359 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 STX1BP61266 288 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 TIMM10P62072 90 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 ZNF658BQ4V348 819 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 GPAT3Q53EU6 434 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 IFI44LQ53G44 452 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 HECTD3Q5T447 861 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 UBALD2Q8IYN6 164 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 PYROXD2Q8N2H3 581 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 BCL2L2Q92843 193 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 SLC25A38Q96DW6 304 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 C11orf24Q96F05 449 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 CFAP36Q96G28 342 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 EBF4Q9BQW3 602 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms