RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 LAT2Q9GZY6 243 aa17.46■□□□□ 0.39
LMNA-221ENST00000506981 SLC38A1Q9H2H9 487 aa17.46■□□□□ 0.39
LMNA-221ENST00000506981 MTHFD2LQ9H903 347 aaPredicted RBP17.46■□□□□ 0.39
LMNA-221ENST00000506981 CHST11Q9NPF2 352 aa17.46■□□□□ 0.39
LMNA-221ENST00000506981 SLC52A3Q9NQ40 469 aa17.46■□□□□ 0.39
LMNA-221ENST00000506981 Q9UFV3 132 aa17.46■□□□□ 0.39
LMNA-221ENST00000506981 GPC6Q9Y625 555 aaPredicted RBP17.46■□□□□ 0.39
LMNA-221ENST00000506981 CENPVL1A0A0U1RR11 272 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 CLCA1A8K7I4 914 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 C5orf58C9J3I9 102 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 OIP5O43482 229 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 FOXF1Q12946 379 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 SKP2Q13309 424 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 MAPRE2Q15555 327 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 MAPK14Q16539 360 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 TMEM44Q2T9K0 475 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 P4HA3Q7Z4N8 544 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 ARSGQ96EG1 525 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 ZNF317Q96PQ6 595 aaPredicted RBP17.45■□□□□ 0.38
LMNA-221ENST00000506981 TM9SF2Q99805 663 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 NSRP1Q9H0G5 558 aaKnown RBP17.45■□□□□ 0.38
LMNA-221ENST00000506981 QRSL1Q9H0R6 528 aaKnown RBP17.45■□□□□ 0.38
LMNA-221ENST00000506981 SLC25A37Q9NYZ2 338 aa17.45■□□□□ 0.38
LMNA-221ENST00000506981 MBD3L4A6NDZ8 208 aaPredicted RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 MBD3L3A6NE82 208 aaPredicted RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 MBD3L5A6NJ08 208 aaPredicted RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 DBIP07108 87 aaKnown RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 LINGO3P0C6S8 592 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 IL7RP16871 459 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 HOXB9P17482 250 aaPredicted RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 PGCP20142 388 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 ELK4P28324 431 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 KCNJ10P78508 379 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 NFYCQ13952 458 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 PDSS1Q5T2R2 415 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 GCNT6Q5T4J0 391 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 AP1ARQ63HQ0 302 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 HMGN2P46Q86SG4 172 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 CMIPQ8IY22 773 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 TNIP2Q8NFZ5 429 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 LILRB4Q8NHJ6 448 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 MBD3L2Q8NHZ7 208 aaPredicted RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 GPR119Q8TDV5 335 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 TMEM234Q8WY98 164 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 TMEM19Q96HH6 336 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 THUMPD3Q9BV44 507 aaKnown RBP17.44■□□□□ 0.38
LMNA-221ENST00000506981 RUBCNLQ9H714 662 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 KCNJ16Q9NPI9 418 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 VAPAQ9P0L0 249 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 SLAMF8Q9P0V8 285 aa17.44■□□□□ 0.38
LMNA-221ENST00000506981 AGAP5A6NIR3 686 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 KDM4EB2RXH2 506 aaPredicted RBP17.43■□□□□ 0.38
LMNA-221ENST00000506981 EIF1AYO14602 144 aaKnown RBP17.43■□□□□ 0.38
LMNA-221ENST00000506981 DVL2O14641 736 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 COL8A1P27658 744 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 ADH6P28332 368 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 CEACAM8P31997 349 aaPredicted RBP17.43■□□□□ 0.38
LMNA-221ENST00000506981 RAC1P63000 192 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 QPRTQ15274 297 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 CDSNQ15517 529 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 SGCBQ16585 318 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 SLC25A35Q3KQZ1 300 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 MMEL1Q495T6 779 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 SEM1Q6ZVN7 128 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 MSRB3Q8IXL7 192 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 DPP10Q8N608 796 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 FBXO27Q8NI29 283 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 SLC38A5Q8WUX1 472 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 C10orf82Q8WW14 230 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 WNT2BQ93097 391 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 MRGPRX4Q96LA9 322 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 ZFP3Q96NJ6 502 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 PINK1Q9BXM7 581 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 A4GALTQ9NPC4 353 aa17.43■□□□□ 0.38
LMNA-221ENST00000506981 TRBV5-3A0A0A0MS03 114 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 A0A0G2JPF8 293 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 SLC22A20A6NK97 555 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 GJE1A6NN92 205 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 HNRNPCL2B2RXH8 293 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 HNRNPCL3B7ZW38 293 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 HNRNPCL1O60812 293 aaKnown RBP17.42■□□□□ 0.38
LMNA-221ENST00000506981 TFPTP0C1Z6 253 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 HNRNPCL4P0DMR1 293 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 BMP2P12643 396 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 PRKCAP17252 672 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 RPS4Y1P22090 263 aaKnown RBP17.42■□□□□ 0.38
LMNA-221ENST00000506981 ADSLP30566 484 aaPredicted RBP17.42■□□□□ 0.38
LMNA-221ENST00000506981 PGM1P36871 562 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 SLC6A8P48029 635 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 SUCLG1P53597 346 aaKnown RBP17.42■□□□□ 0.38
LMNA-221ENST00000506981 CLDN20P56880 219 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 KLF10Q13118 480 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 LIN52Q52LA3 116 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 HIST2H2BCQ6DN03 193 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 PPP4R4Q6NUP7 873 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 ADGRE4PQ86SQ3 457 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 FAM71CQ8NEG0 241 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 OR52P1PQ8NH57 321 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 ZNF563Q8TA94 476 aa17.42■□□□□ 0.38
LMNA-221ENST00000506981 BBS10Q8TAM1 723 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms