RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZCCHC7Q8N3Z6 543 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 AQP11Q8NBQ7 271 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 TRPV1Q8NER1 839 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 TRMT10AQ8TBZ6 339 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 SPRYD4Q8WW59 207 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 GTF3AQ92664 365 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 OSTF1Q92882 214 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 ADIPOR1Q96A54 375 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 TADA1Q96BN2 335 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 DHTKD1Q96HY7 919 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 ST6GALNAC5Q9BVH7 336 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 TBC1D10AQ9BXI6 508 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 NFKBIZQ9BYH8 718 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 FGFBP2Q9BYJ0 223 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 COMMD4Q9H0A8 199 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 VCX2Q9H322 139 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 LIME1Q9H400 295 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 ESM1Q9NQ30 184 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 ZDHHC18Q9NUE0 388 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 RBM28Q9NW13 759 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 SMPD3Q9NY59 655 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 THAP10Q9P2Z0 257 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 RNF14Q9UBS8 474 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 CPQQ9Y646 472 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 DOCK1Q14185 1865 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 LOC285556D6RIA3 1793 aa2.66□□□□□ -1.98
TRAPPC11-205ENST00000506426 SIPA1L1O43166 1804 aa2.65□□□□□ -1.98
TRAPPC11-205ENST00000506426 PHIPQ8WWQ0 1821 aa2.65□□□□□ -1.98
TRAPPC11-205ENST00000506426 COL2A1P02458 1487 aaPredicted RBP2.65□□□□□ -1.98
TRAPPC11-205ENST00000506426 DDX60LQ5H9U9 1706 aaKnown RBP2.65□□□□□ -1.98
TRAPPC11-205ENST00000506426 MAST2Q6P0Q8 1798 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGLV4-3A0A075B6K6 122 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 MEX3AA1L020 520 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 C11orf98E9PRG8 122 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 CTAGE5O15320 804 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 PRKAB2O43741 272 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 OR1F1O43749 312 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 NUDT21O43809 227 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 DUX1O43812 170 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 EDIL3O43854 480 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 TYROBPO43914 113 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SNAP91O60641 907 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SURF6O75683 361 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 TM7SF2O76062 418 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SORBS2O94875 1100 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SNX4O95219 450 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 TPM2P07951 284 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 CFC1BP0CG36 223 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 CFC1P0CG37 223 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 ANXA3P12429 323 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 UGT1A4P22310 534 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SPRP35270 261 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 CAPGP40121 348 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC1A4P43007 532 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 STK19P49842 368 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 PPT1P50897 306 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 PJVKQ0ZLH3 352 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 RAB35Q15286 201 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 UBE2V2Q15819 145 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SEL1L3Q68CR1 1132 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 PNCKQ6P2M8 343 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SCYL2Q6P3W7 929 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 HACD2Q6Y1H2 254 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF841Q6ZN19 808 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 USP43Q70EL4 1123 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 DPY19L4Q7Z388 723 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 RPAINQ86UA6 219 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 CATSPER3Q86XQ3 398 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 RNF130Q86XS8 419 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 ITPRIPQ8IWB1 547 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF679Q8IYX0 411 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 EIF1ADQ8N9N8 165 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SDR42E1Q8WUS8 393 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 CTNNBL1Q8WYA6 563 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 DNASE2BQ8WZ79 361 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 MYLPFQ96A32 169 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 DYNLL2Q96FJ2 89 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC45A3Q96JT2 553 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 PRICKLE1Q96MT3 831 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 OMDQ99983 421 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC30A2Q9BRI3 323 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 FEM1AQ9BSK4 669 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 TCHPQ9BT92 498 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 RPP25Q9BUL9 199 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 TRIM9Q9C026 710 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 GPN2Q9H9Y4 310 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 ADGRL4Q9HBW9 690 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 NUDT4Q9NZJ9 180 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SPATA2Q9UM82 520 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 GSTK1Q9Y2Q3 226 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 EXOSC1Q9Y3B2 195 aaKnown RBP2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 LRP12Q9Y561 859 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 SPACA6W5XKT8 324 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 GON4LQ3T8J9 2241 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 EYSQ5T1H1 3165 aa2.65□□□□□ -1.99
TRAPPC11-205ENST00000506426 NOTCH4Q99466 2003 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ALPK3Q96L96 1907 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TRBV7-9A0A0J9YWB2 115 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TEX48A0A1B0GUV7 120 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms