RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 CPSF4LA6NMK7 179 aaKnown RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ETV2O00321 342 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 TP53I11O14683 189 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 BCKDKO14874 412 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 KLF4O43474 513 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 NDUFB5O43674 189 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 OR10H3O60404 316 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 CDC40O60508 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ICOSLGO75144 302 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 BCAS1O75363 584 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 OR6B1O95007 311 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 LIPCP11150 499 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 OSMP13725 252 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 PGCP20142 388 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 PRKACGP22612 351 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 HTR3AP46098 478 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 YAP1P46937 504 aaKnown RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 GSSP48637 474 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 NOVA1P51513 510 aaKnown RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 CXCR4P61073 352 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 GABREP78334 506 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 NHLH1Q02575 133 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 C17orf67Q0P5P2 114 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 TSPAN31Q12999 210 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 TOP3AQ13472 1001 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ANKDD1AQ495B1 522 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 KCTD21Q4G0X4 260 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 WBP2NLQ6ICG8 309 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 UGT2A3Q6UWM9 527 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 RASSF6Q6ZTQ3 369 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 GDF7Q7Z4P5 450 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 THAP5Q7Z6K1 395 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 MRGPREQ86SM8 312 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 APLFQ8IW19 511 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 CDK20Q8IZL9 346 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 HS3ST5Q8IZT8 346 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ZNF614Q8N883 585 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 AQP11Q8NBQ7 271 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 OR52J3Q8NH60 311 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 GNPDA2Q8TDQ7 276 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 HGDQ93099 445 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ZNF566Q969W8 418 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 SGCZQ96LD1 299 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 BARD1Q99728 777 aaKnown RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 TMEM43Q9BTV4 400 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 PRRG3Q9BZD7 231 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 ASCL3Q9NQ33 180 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 SLC7A7Q9UM01 511 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 MAGED1Q9Y5V3 778 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-216ENST00000502848 SEC16AO15027 2179 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
NR1I3-216ENST00000502848 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 IGHV3-20A0A0C4DH32 117 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 A0A1B0GWA3 101 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 GTPBP1O00178 669 aaKnown RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 MRPS14O60783 128 aaKnown RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 LYPD3O95274 346 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 LYNP07948 512 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 UBTFL6P0CB48 400 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 HTR2AP28223 471 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 DLSTP36957 453 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 SLC1A3P43003 542 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 RFX3P48380 749 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 P2RX1P51575 399 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 MLF1P58340 268 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 CBFBQ13951 182 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 COL9A2Q14055 689 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 SEC23BQ15437 767 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 ZNF791Q3KP31 576 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 RBM48Q5RL73 367 aaKnown RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 ZNF691Q5VV52 312 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 KLHL17Q6TDP4 642 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 LYPD8Q6UX82 237 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 TMPRSS11FQ6ZWK6 438 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 OR9Q2Q8NGE9 314 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 OR5W2Q8NH69 310 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 PHOSPHO1Q8TCT1 267 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 TMEM239Q8WW34 195 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 TRUB1Q8WWH5 349 aaKnown RBP8.31□□□□□ -1.08
NR1I3-216ENST00000502848 LIPHQ8WWY8 451 aa8.31□□□□□ -1.08
NR1I3-216ENST00000502848 ST8SIA1Q92185 356 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms