RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CDH24Q86UP0 819 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 TMCO5AQ8N6Q1 288 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 GLB1L3Q8NCI6 653 aaPredicted RBP16.53■□□□□ 0.24
HOXD11-202ENST00000498438 OR10D3Q8NH80 312 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 PANX1Q96RD7 426 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 RNF122Q9H9V4 155 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 USH1CQ9Y6N9 552 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 SERINC4A6NH21 518 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 TUBAL3A6NHL2 446 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 CCDC154A6NI56 674 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 TNFSF11O14788 317 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 KIAA0513O60268 411 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 DIAPH2O60879 1101 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 SLC22A3O75751 556 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 UGT2B17O75795 530 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 SMNDC1O75940 238 aaKnown RBP eCLIP16.52■□□□□ 0.24
HOXD11-202ENST00000498438 AQP8O94778 261 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 FCGR2AP12318 317 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 IL11P20809 199 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 ELK4P28324 431 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 CPOXP36551 454 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 EIF1P41567 113 aaKnown RBP16.52■□□□□ 0.24
HOXD11-202ENST00000498438 CCR4P51679 360 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 TOMM34Q15785 309 aaPredicted RBP16.52■□□□□ 0.24
HOXD11-202ENST00000498438 GSTA3Q16772 222 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 TRIML2Q8N7C3 387 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 OR2V1Q8NHB1 315 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 FBXO27Q8NI29 283 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 GPR119Q8TDV5 335 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 LRRC8CQ8TDW0 803 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 FAM222BQ8WU58 562 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 STARD4Q96DR4 205 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 C7orf26Q96N11 449 aa16.52■□□□□ 0.24
HOXD11-202ENST00000498438 A8MXE2 369 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 HMGN4O00479 90 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ADAMDEC1O15204 470 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 UBDO15205 165 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ZNF264O43296 627 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 CXCL13O43927 109 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 EIF4E2O60573 245 aaKnown RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 CTAG2O75638 210 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 GSNP06396 782 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 SHC1P29353 583 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 KIR2DL2P43627 348 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 SLC6A8P48029 635 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 LRRC74AQ0VAA2 488 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 SKP2Q13309 424 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 TYW3Q6IPR3 259 aaKnown RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 DNAJC14Q6Y2X3 702 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ZNF621Q6ZSS3 439 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ESPNLQ6ZVH7 1005 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 HDXQ7Z353 690 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 BTLAQ7Z6A9 289 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 OR5W2Q8NH69 310 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 LINC01560Q8TB33 94 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ROPN1LQ96C74 230 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 KLHL15Q96M94 604 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 GPATCH1Q9BRR8 931 aaKnown RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 SLCO1B3Q9NPD5 702 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 POLE3Q9NRF9 147 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 SDR39U1Q9NRG7 319 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ARGLU1Q9NWB6 273 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 PAQR5Q9NXK6 330 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ZIM2Q9NZV7 527 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 WDR45Q9Y484 360 aa16.51■□□□□ 0.23
HOXD11-202ENST00000498438 GPC6Q9Y625 555 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 HRNRQ86YZ3 2850 aaPredicted RBP16.51■□□□□ 0.23
HOXD11-202ENST00000498438 ABCA4P78363 2273 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 A0A0J9YW62 118 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 PRAMEF27A3QJZ7 478 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 A6NNC1 897 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 MSTNO14793 375 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 IL6P05231 212 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 GUSBP08236 651 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 H2AFXP16104 143 aaPredicted RBP16.5■□□□□ 0.23
HOXD11-202ENST00000498438 PRKCAP17252 672 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 ADH6P28332 368 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 SFTPDP35247 375 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 HPCAP84074 193 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 CBFBQ13951 182 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 GUSBP1Q15486 140 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 MAPK14Q16539 360 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 HBMQ6B0K9 141 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 EPGNQ6UW88 154 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 FRRS1Q6ZNA5 592 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 LILRA2Q8N149 483 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 GOLGA6L1Q8N7Z2 621 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 TOR1AIP2Q8NFQ8 470 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 OR9I1Q8NGQ6 314 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 PNPT1Q8TCS8 783 aaKnown RBP16.5■□□□□ 0.23
HOXD11-202ENST00000498438 ZNF524Q96C55 264 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 PRRG4Q9BZD6 226 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
HOXD11-202ENST00000498438 OPN3Q9H1Y3 402 aaPredicted RBP16.5■□□□□ 0.23
HOXD11-202ENST00000498438 DNAJB12Q9NXW2 375 aaKnown RBP16.5■□□□□ 0.23
HOXD11-202ENST00000498438 MCTS1Q9ULC4 181 aaKnown RBP16.5■□□□□ 0.23
HOXD11-202ENST00000498438 RFXANKO14593 260 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms