RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CDRT4Q8N9R6 151 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 FNDC9Q8TBE3 224 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 GIMAP5Q96F15 307 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 PANX1Q96RD7 426 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 ELAC2Q9BQ52 826 aaKnown RBP20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 PINK1Q9BXM7 581 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 FAM107BQ9H098 131 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 OPN3Q9H1Y3 402 aaPredicted RBP20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 GSX1Q9H4S2 264 aaPredicted RBP20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 RNF122Q9H9V4 155 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 CCDC167Q9P0B6 97 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 ZNF175Q9Y473 711 aa20.29■□□□□ 0.84
CDKN2A-208ENST00000498124 DEFB108AA8MXU0 73 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 H3BML4 177 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 NR5A2O00482 541 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 TNFRSF21O75509 655 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 SMNDC1O75940 238 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 NKX2-2O95096 273 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 ANGPTL1O95841 491 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 KRT16P08779 473 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 HOXB4P17483 251 aaPredicted RBP20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 UQCRC2P22695 453 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 TP53BP2Q13625 1128 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 GLYR1Q49A26 553 aaPredicted RBP20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 MFSD12Q6NUT3 480 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 GGNQ86UU5 652 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 METTL25Q8N6Q8 603 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 TRIML2Q8N7C3 387 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 ITCHQ96J02 903 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 PTGES2Q9H7Z7 377 aa20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 MRTO4Q9UKD2 239 aaKnown RBP20.28■□□□□ 0.84
CDKN2A-208ENST00000498124 RNF103-CHMP3A0A140T963 221 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 CCDC154A6NI56 674 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 LINC01387J3KSC0 135 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 ACP2P11117 423 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 HOXC12P31275 282 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 CD79BP40259 229 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 PSMD4P55036 377 aaKnown RBP20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 SIRPAP78324 504 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 PON3Q15166 354 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 CHMP1BQ7LBR1 199 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 ZAR1Q86SH2 424 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 GALNT10Q86SR1 603 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 CXorf67Q86X51 503 aaPredicted RBP20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 SPDL1Q96EA4 605 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 WFIKKN1Q96NZ8 548 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 NPAS1Q99742 590 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 PIGQQ9BRB3 760 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 TBL1XR1Q9BZK7 514 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 KLHL28Q9NXS3 571 aa20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 C6orf203Q9P0P8 240 aaPredicted RBP20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 FAF1Q9UNN5 650 aaPredicted RBP20.27■□□□□ 0.84
CDKN2A-208ENST00000498124 RFXANKO14593 260 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 SOX30O94993 753 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 KCNH1O95259 989 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 HMGN2P05204 90 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 ALOX5P09917 674 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 FOSL1P15407 271 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 EEFSECP57772 596 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 LASP1Q14847 261 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 EXOSC6Q5RKV6 272 aaKnown RBP20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 OR5AK3PQ8NH89 298 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 FBXO30Q8TB52 745 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 GPR151Q8TDV0 419 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 VPS33AQ96AX1 596 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 INPP5KQ9BT40 448 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 ACTRT3Q9BYD9 372 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 SAR1AQ9NR31 198 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 NDRG3Q9UGV2 375 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 AP4B1Q9Y6B7 739 aa20.26■□□□□ 0.83
CDKN2A-208ENST00000498124 ALG1L2C9J202 215 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 GMFGO60234 142 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 SNX3O60493 162 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 AQP8O94778 261 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 OXSR1O95747 527 aaPredicted RBP20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 NGFRP08138 427 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 CD8BP10966 210 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 UGT2B10P36537 528 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 CLK3P49761 638 aaKnown RBP20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 C17orf67Q0P5P2 114 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 C6orf10Q5SRN2 563 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 ZNF621Q6ZSS3 439 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 C6orf120Q7Z4R8 191 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 OR4C3Q8NH37 302 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 FAM110BQ8TC76 370 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 TSPEARQ8WU66 669 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 SLC9A6Q92581 669 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 JADE3Q92613 823 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 C16orf58Q96GQ5 468 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 STACQ99469 402 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 KLHDC3Q9BQ90 382 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 SLC35A5Q9BS91 424 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 GPATCH2Q9NW75 528 aa20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 BEX4Q9NWD9 120 aaPredicted RBP20.25■□□□□ 0.83
CDKN2A-208ENST00000498124 CCDC22O60826 627 aa20.24■□□□□ 0.83
CDKN2A-208ENST00000498124 ANP32DO95626 131 aa20.24■□□□□ 0.83
CDKN2A-208ENST00000498124 ZNF17P17021 662 aa20.24■□□□□ 0.83
CDKN2A-208ENST00000498124 ADSLP30566 484 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-208ENST00000498124 CHI3L1P36222 383 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-208ENST00000498124 SLC6A8P48029 635 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms