RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PHOSPHO1Q8TCT1 267 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 TMEM239Q8WW34 195 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 SGCDQ92629 289 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 HSPBAP1Q96EW2 488 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 NODALQ96S42 347 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 LPAR4Q99677 370 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 CMKLR1Q99788 373 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 TRIM2Q9C040 744 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 YIPF3Q9GZM5 350 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 HOXD1Q9GZZ0 328 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 RBM38Q9H0Z9 239 aaKnown RBP7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 DSN1Q9H410 356 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 WDR54Q9H977 334 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC25A19Q9HC21 320 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 UBQLN4Q9NRR5 601 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 PAK1IP1Q9NWT1 392 aaPredicted RBP7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF226Q9NYT6 803 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 FLRT3Q9NZU0 649 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 CDH10Q9Y6N8 788 aa7.43□□□□□ -1.22
PDZRN3-212ENST00000498048 CACNA1HO95180 2353 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 WDR87Q6ZQQ6 2873 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 VPS13AQ96RL7 3174 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 CDC14CA4D256 554 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 B4E171 279 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 RNF223E7ERA6 249 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 TO15178 435 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 RGS10O43665 173 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 TSPAN2O60636 221 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 LYPD3O95274 346 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 FADS2O95864 444 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 MT-ND2P03891 347 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 TP53P04637 393 aaPredicted RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 KLK3P07288 261 aaPredicted RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 IGFBP1P08833 259 aaPredicted RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 HTR1AP08908 422 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF806P0C7X5 589 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 IFI30P13284 250 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 GABRB1P18505 474 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ITIH1P19827 911 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ABCD3P28288 659 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ETV5P41161 510 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 TSPAN7P41732 249 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 RBM34P42696 430 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SMSP52788 366 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 NRG3P56975 720 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC26A5P58743 744 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 COPZ1P61923 177 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC35A2P78381 396 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SPEM2Q0P670 501 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SKP2Q13309 424 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ILKQ13418 452 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 RAB39AQ14964 217 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 NCF4Q15080 339 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 CD226Q15762 336 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 FNDC7Q5VTL7 733 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 AP1ARQ63HQ0 302 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 LCN10Q6JVE6 187 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 MRPL14Q6P1L8 145 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 BORAQ6PGQ7 559 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 KIRREL2Q6UWL6 708 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 HSDL2Q6YN16 418 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 RASSF6Q6ZTQ3 369 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 PTCHD4Q6ZW05 846 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 CPEB2Q7Z5Q1 589 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 KIF18BQ86Y91 864 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 OR52L1Q8NGH7 329 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 OR8D4Q8NGM9 314 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 PFN4Q8NHR9 129 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 IPCEF1Q8WWN9 437 aaPredicted RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 C8orf44Q96CB5 159 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 LRFN5Q96NI6 719 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC38A2Q96QD8 506 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ADOQ96SZ5 270 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 PRSS27Q9BQR3 290 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 RHNO1Q9BSD3 238 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 DPH1Q9BZG8 443 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 TBL1XR1Q9BZK7 514 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 PLA2G12AQ9BZM1 189 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 SEMA4CQ9C0C4 833 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 EGLN3Q9H6Z9 239 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 EXOSC3Q9NQT5 275 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 FBXO8Q9NRD0 319 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 CLN6Q9NWW5 311 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 DNAJC27Q9NZQ0 273 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 NCDNQ9UBB6 729 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 PISDQ9UG56 409 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF223Q9UK11 482 aaPredicted RBP7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 MED31Q9Y3C7 131 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 OTOGLQ3ZCN5 2332 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 GPR179Q6PRD1 2367 aa7.42□□□□□ -1.22
PDZRN3-212ENST00000498048 MUC3AQ02505 3323 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 TEX51A0A1B0GUA7 166 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 A0A1W2PQD3 144 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 UNC119BA6NIH7 251 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 ENO4A6NNW6 628 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 PTGES3LE9PB15 166 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 TMX2-CTNND1H3BSU7 103 aa7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 GTPBP1O00178 669 aaKnown RBP7.41□□□□□ -1.22
PDZRN3-212ENST00000498048 CDX4O14627 284 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms