RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 ICAM5Q9UMF0 924 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 RPH3AQ9Y2J0 694 aaPredicted RBP10.82□□□□□ -0.68
CUX1-210ENST00000497815 CHST2Q9Y4C5 530 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 LIPGQ9Y5X9 500 aa10.82□□□□□ -0.68
CUX1-210ENST00000497815 ANKUB1A6NFN9 424 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SHISA8B8ZZ34 492 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 FAM47E-STBD1D6RA91 191 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 AP3D1O14617 1153 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 ARPC2O15144 300 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 GSC2O15499 205 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 ZNHIT1O43257 154 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SUV39H1O43463 412 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 C1QL1O75973 258 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 EPPINO95925 133 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SERPINA1P01009 418 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 IFNA14P01570 189 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 PRG2P13727 222 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 HK1P19367 917 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 CD247P20963 164 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 ME2P23368 584 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SRD5A2P31213 254 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 DSCR4P56555 118 aaPredicted RBP10.81□□□□□ -0.68
CUX1-210ENST00000497815 FOXK1P85037 733 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 HOXC5Q00444 222 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 HSF1Q00613 529 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 CBFBQ13951 182 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 TOMM34Q15785 309 aaPredicted RBP10.81□□□□□ -0.68
CUX1-210ENST00000497815 DUSP7Q16829 419 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SPATS1Q496A3 300 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 EIPR1Q53HC9 387 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 DHRS4L2Q6PKH6 230 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SPPL2CQ8IUH8 684 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SIAH3Q8IW03 269 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 ARHGAP24Q8N264 748 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 FAM71CQ8NEG0 241 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
CUX1-210ENST00000497815 GPR32P1Q8NGA4 272 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 OR5M1Q8NGP8 315 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 OR5W2Q8NH69 310 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 VANGL1Q8TAA9 524 aaPredicted RBP10.81□□□□□ -0.68
CUX1-210ENST00000497815 NR4A3Q92570 626 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 MCUR1Q96AQ8 359 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 C1GALT1C1Q96EU7 318 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 CADM1Q9BY67 442 aaKnown RBP10.81□□□□□ -0.68
CUX1-210ENST00000497815 UBQLN3Q9H347 655 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 LDAHQ9H6V9 325 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 HHATLQ9HCP6 504 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 KLHL28Q9NXS3 571 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 MAGEL2Q9UJ55 1249 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 SNX13Q9Y5W8 968 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 BOD1L1Q8NFC6 3051 aa10.81□□□□□ -0.68
CUX1-210ENST00000497815 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 CFAP73A6NFT4 308 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 B8ZZF3 427 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 M0R3H8 397 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 ADAM11O75078 769 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 HPNP05981 417 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 FESP07332 822 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 LINGO3P0C6S8 592 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 TNFRSF1BP20333 461 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 KCNJ5P48544 419 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 IDH2P48735 452 aaKnown RBP10.8□□□□□ -0.68
CUX1-210ENST00000497815 SUMO3P55854 103 aaPredicted RBP10.8□□□□□ -0.68
CUX1-210ENST00000497815 BNIP2Q12982 314 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 QPRTQ15274 297 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 ZSWIM7Q19AV6 140 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 RAET1LQ5VY80 246 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 ZNF324BQ6AW86 544 aaPredicted RBP10.8□□□□□ -0.68
CUX1-210ENST00000497815 CYP2R1Q6VVX0 501 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 BHLHE22Q8NFJ8 381 aaPredicted RBP10.8□□□□□ -0.68
CUX1-210ENST00000497815 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 GPR119Q8TDV5 335 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 PROX1Q92786 737 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 ZNF524Q96C55 264 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 DTNBP1Q96EV8 351 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 GPR137Q96N19 417 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 NPAS1Q99742 590 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 WFDC6Q9BQY6 131 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 PRR14Q9BWN1 585 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 OR2B2Q9GZK3 357 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 LRMDAQ9H2I8 198 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 ZDHHC11Q9H8X9 412 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 EXOSC3Q9NQT5 275 aaKnown RBP10.8□□□□□ -0.68
CUX1-210ENST00000497815 MED17Q9NVC6 651 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 ADPRHL2Q9NX46 363 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 TNFRSF10DQ9UBN6 386 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 SLC6A5Q9Y345 797 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 SH3GLB1Q9Y371 365 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 V9GYQ6 96 aa10.8□□□□□ -0.68
CUX1-210ENST00000497815 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 ZIC3O60481 467 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 WISP1O95388 367 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 PGCP20142 388 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 ATP6V1B2P21281 511 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 OR1E2P47887 323 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 SLC6A8P48029 635 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 TDGF1P3P51864 188 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 RGS8P57771 180 aaPredicted RBP10.79□□□□□ -0.68
CUX1-210ENST00000497815 MS4A2Q01362 244 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 TLE1Q04724 770 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms