RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 ARG2P78540 354 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 C17orf67Q0P5P2 114 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 RIPK1Q13546 671 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 TUBA3CQ13748 450 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 NRF1Q16656 503 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 TUBA3EQ6PEY2 450 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 BORAQ6PGQ7 559 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 DEF8Q6ZN54 512 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 MARCH3Q86UD3 253 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 GRHL3Q8TE85 626 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 PAQR8Q8TEZ7 354 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 C5orf34Q96MH7 638 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 POLR2J2Q9GZM3 115 aaKnown RBP13.71□□□□□ -0.21
GAPDH-210ENST00000496049 POLR2J3Q9H1A7 115 aaKnown RBP13.71□□□□□ -0.21
GAPDH-210ENST00000496049 SLC25A18Q9H1K4 315 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 RLIMQ9NVW2 624 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 ANKRD10Q9NXR5 420 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 DNAJB12Q9NXW2 375 aaKnown RBP13.71□□□□□ -0.21
GAPDH-210ENST00000496049 LRFN1Q9P244 771 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 WIF1Q9Y5W5 379 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 CHCHD2Q9Y6H1 151 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-210ENST00000496049 ZFHX3Q15911 3703 aa13.71□□□□□ -0.21
GAPDH-210ENST00000496049 OTOGQ6ZRI0 2925 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 OR5H15A6NDH6 313 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 CLDN24A6NM45 220 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 FAM47E-STBD1D6RA91 191 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 H0Y3Z8 333 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 GNGT2O14610 69 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ADAMDEC1O15204 470 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 MGRN1O60291 552 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 FMO6PO60774 539 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 CEACAM4O75871 244 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 SNX4O95219 450 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 BAG2O95816 211 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 LDLRP01130 860 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ITGB2P05107 769 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 TNFRSF1BP20333 461 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ELAVL4P26378 380 aaKnown RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 MAGEA2P43356 314 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 OR1E2P47887 323 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 MASP1P48740 699 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 SUMO3P55854 103 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 COPZ1P61923 177 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 OR1C1Q15619 314 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 FNDC7Q5VTL7 733 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF787Q6DD87 383 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 DESI1Q6ICB0 168 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 PLEKHM3Q6ZWE6 761 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 PIWIL3Q7Z3Z3 882 aaKnown RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 PACS2Q86VP3 889 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 PSD4Q8NDX1 1056 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 FAM71CQ8NEG0 241 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 FDCSPQ8NFU4 85 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 RNF138Q8WVD3 245 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 CNOT9Q92600 299 aaKnown RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 SLCO4A1Q96BD0 722 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF559Q9BR84 538 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 LAT2Q9GZY6 243 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF552Q9H707 407 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 C6orf203Q9P0P8 240 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-210ENST00000496049 ENPP4Q9Y6X5 453 aa13.7□□□□□ -0.22
GAPDH-210ENST00000496049 DOCK10Q96BY6 2186 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 ANKRD33BA6NCL7 494 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 TMEM229AB2RXF0 380 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 MKRN2OSH3BPM6 223 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 TIPRLO75663 272 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 SLC25A12O75746 678 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 NUDT14O95848 222 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 WDPCPO95876 746 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CST1P01037 141 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 MT-ND1P03886 318 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CCL3P10147 92 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CD46P15529 392 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 RHCEP18577 417 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 MSX1P28360 303 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CASP3P42574 277 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 SMIM11AP58511 58 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 TAS2R41P59536 307 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 VLDLRP98155 873 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 SKP2Q13309 424 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CBFBQ13951 182 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CD226Q15762 336 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF468Q5VIY5 522 aaPredicted RBP13.69□□□□□ -0.22
GAPDH-210ENST00000496049 PRAMEF20Q5VT98 475 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 OR6T1Q8NGN1 323 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 B4GALNT2Q8NHY0 566 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 SH3YL1Q96HL8 342 aaPredicted RBP13.69□□□□□ -0.22
GAPDH-210ENST00000496049 C7orf34Q96L11 122 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF597Q96LX8 424 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 PRRC1Q96M27 445 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF300Q96RE9 604 aaPredicted RBP13.69□□□□□ -0.22
GAPDH-210ENST00000496049 PIP5K1AQ99755 562 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 BDH2Q9BUT1 245 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 ANGPTL4Q9BY76 406 aa13.69□□□□□ -0.22
GAPDH-210ENST00000496049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.69□□□□□ -0.227e-7■□□□□ 10.4
GAPDH-210ENST00000496049 RNPEPL1Q9HAU8 725 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms