RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 P2RX1P51575 399 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 SUMO3P55854 103 aaPredicted RBP19.66■□□□□ 0.74
HDDC3-203ENST00000494993 ATP5J2P56134 94 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 PPP2R2BQ00005 443 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 KLHL26Q53HC5 615 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 NUFIP2Q7Z417 695 aaKnown RBP19.66■□□□□ 0.74
HDDC3-203ENST00000494993 TUSC5Q8IXB3 177 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 GABRG1Q8N1C3 465 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 RAB3IL1Q8TBN0 382 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 HDHD5Q9BXW7 423 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 ACTRT3Q9BYD9 372 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 HOXD1Q9GZZ0 328 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 MKS1Q9NXB0 559 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 KLHL13Q9P2N7 655 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 CARD8Q9Y2G2 431 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 ACTL7BQ9Y614 415 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 GPC6Q9Y625 555 aaPredicted RBP19.66■□□□□ 0.74
HDDC3-203ENST00000494993 GJE1A6NN92 205 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 H3BNH8 94 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 NPHS1O60500 1241 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 ALDH3A1P30838 453 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 CCT3P49368 545 aaKnown RBP19.65■□□□□ 0.74
HDDC3-203ENST00000494993 RNF144AP50876 292 aaPredicted RBP19.65■□□□□ 0.74
HDDC3-203ENST00000494993 TSC22D1Q15714 1073 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 ARL13AQ5H913 290 aaPredicted RBP19.65■□□□□ 0.74
HDDC3-203ENST00000494993 DCST2Q5T1A1 773 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.65■□□□□ 0.74
HDDC3-203ENST00000494993 ALKBH2Q6NS38 261 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 ADAM5Q6NVV9 412 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 FCRLAQ7L513 359 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 LRRN4CLQ8ND94 238 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 OR56A1Q8NGH5 318 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 PSMA8Q8TAA3 256 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 ADAMTS15Q8TE58 950 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 OR5P2Q8WZ92 322 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 PPP3R2Q96LZ3 170 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 CXorf36Q9H7Y0 433 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 COQ10BQ9H8M1 238 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 GP6Q9HCN6 339 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 FAF1Q9UNN5 650 aaPredicted RBP19.65■□□□□ 0.74
HDDC3-203ENST00000494993 LAMP3Q9UQV4 416 aa19.65■□□□□ 0.74
HDDC3-203ENST00000494993 KIAA1324LA8MWY0 1029 aaPredicted RBP19.64■□□□□ 0.73
HDDC3-203ENST00000494993 IL32P24001 234 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 ATP12AP54707 1039 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 RPS4XP62701 263 aaKnown RBP19.64■□□□□ 0.73
HDDC3-203ENST00000494993 TP53BP2Q13625 1128 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 CAPRIN1Q14444 709 aaKnown RBP19.64■□□□□ 0.73
HDDC3-203ENST00000494993 TOMM34Q15785 309 aaPredicted RBP19.64■□□□□ 0.73
HDDC3-203ENST00000494993 TMEM176BQ3YBM2 270 aaPredicted RBP19.64■□□□□ 0.73
HDDC3-203ENST00000494993 XKR7Q5GH72 579 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 SFRP5Q5T4F7 317 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 GPR119Q8TDV5 335 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 APOPT1Q96IL0 206 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 EML4Q9HC35 981 aaKnown RBP19.64■□□□□ 0.73
HDDC3-203ENST00000494993 GPATCH2Q9NW75 528 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 RNF115Q9Y4L5 304 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 KCNE3Q9Y6H6 103 aa19.64■□□□□ 0.73
HDDC3-203ENST00000494993 SONP18583 2426 aaKnown RBP19.63■□□□□ 0.73
HDDC3-203ENST00000494993 GTPBP1O00178 669 aaKnown RBP19.63■□□□□ 0.73
HDDC3-203ENST00000494993 PEX11AO75192 247 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 PRKD3O94806 890 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 SOX30O94993 753 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 NTN1O95631 604 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 KRT16P08779 473 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 PRKCAP17252 672 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 PTGR1Q14914 329 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 NDUFAF6Q330K2 333 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 NCMAPQ5T1S8 102 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 NATD1Q8N6N6 113 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 ATP6V1C2Q8NEY4 427 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 LILRB1Q8NHL6 650 aaPredicted RBP19.63■□□□□ 0.73
HDDC3-203ENST00000494993 AGR3Q8TD06 166 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 ZFP90Q8TF47 636 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 C1orf50Q9BV19 199 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 MECRQ9BV79 373 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 ATAD3AQ9NVI7 634 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 DTNAQ9Y4J8 743 aa19.63■□□□□ 0.73
HDDC3-203ENST00000494993 ABCA1O95477 2261 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 NPIPB9F8W1W9 429 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 LYPLA1O75608 230 aaPredicted RBP19.62■□□□□ 0.73
HDDC3-203ENST00000494993 C6orf47O95873 294 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 YES1P07947 543 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 SELENBP1Q13228 472 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 TNK1Q13470 666 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 TAB1Q15750 504 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 LSM12Q3MHD2 195 aaKnown RBP19.62■□□□□ 0.73
HDDC3-203ENST00000494993 SPDYE7PQ495Y7 208 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 ATP6AP1LQ52LC2 224 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 SLC43A2Q8N370 569 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 ZNF614Q8N883 585 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 BANPQ8N9N5 519 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 SFXN5Q8TD22 340 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 HSD17B8Q92506 261 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 KISS1RQ969F8 398 aaPredicted RBP19.62■□□□□ 0.73
HDDC3-203ENST00000494993 FBXW5Q969U6 566 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 MRGPRX4Q96LA9 322 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 ESRP2Q9H6T0 727 aaKnown RBP19.62■□□□□ 0.73
HDDC3-203ENST00000494993 ANKZF1Q9H8Y5 726 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 NGBQ9NPG2 151 aa19.62■□□□□ 0.73
HDDC3-203ENST00000494993 OVOL3O00110 214 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms