RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 HMGN4O00479 90 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 KIAA0513O60268 411 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 UGT2B17O75795 530 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 CYP7B1O75881 506 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 SYNGR4O95473 234 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 CAPN3P20807 821 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 CDKN2CP42773 168 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 IDH3AP50213 366 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 RNF144AP50876 292 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-211ENST00000494800 TPD52P55327 224 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-211ENST00000494800 FOXF2Q12947 444 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 GNA13Q14344 377 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 TIGD2Q4W5G0 525 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 C6orf10Q5SRN2 563 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 CBLN3Q6UW01 205 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 GGNQ86UU5 652 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 LILRA2Q8N149 483 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 ZNF619Q8N2I2 560 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 CNEP1R1Q8N9A8 125 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 CKAP2Q8WWK9 683 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 MRGPRX4Q96LA9 322 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 TRNT1Q96Q11 434 aaKnown RBP15.88■□□□□ 0.13
HDAC4-211ENST00000494800 LAT2Q9GZY6 243 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 TIGARQ9NQ88 270 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 L3MBTL1Q9Y468 752 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 A0A1W2PNV4 684 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 TMEM247A6NEH6 219 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 PLGP00747 810 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 ZCCHC18P0CG32 403 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 NR2F1P10589 423 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 PSMA4P25789 261 aaKnown RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 DLX5P56178 289 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 SORDQ00796 357 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 FOXF1Q12946 379 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 TYW3Q6IPR3 259 aaKnown RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 PLXDC2Q6UX71 529 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 DNAJC14Q6Y2X3 702 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 LUZP2Q86TE4 346 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 OR10D3Q8NH80 312 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 OR2V1Q8NHB1 315 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 FBXO27Q8NI29 283 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 FNDC9Q8TBE3 224 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 GPR119Q8TDV5 335 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 TMEM234Q8WY98 164 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 FIG4Q92562 907 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 PMM1Q92871 262 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 ARSGQ96EG1 525 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 REXO5Q96IC2 774 aaKnown RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 ZNF845Q96IR2 970 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 LURAP1Q96LR2 239 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 RBM24Q9BX46 236 aaKnown RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 SAP130Q9H0E3 1048 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 TMEM185BQ9H7F4 350 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 RNF122Q9H9V4 155 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 THUMPD1Q9NXG2 353 aaKnown RBP15.87■□□□□ 0.13
HDAC4-211ENST00000494800 JKAMPQ9P055 326 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 NOTCH2Q04721 2471 aa15.87■□□□□ 0.13
HDAC4-211ENST00000494800 TUBAL3A6NHL2 446 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 ADAMDEC1O15204 470 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 H6PDO95479 791 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 PABPC4LP0CB38 370 aaKnown RBP15.86■□□□□ 0.13
HDAC4-211ENST00000494800 UBTFL6P0CB48 400 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-211ENST00000494800 PRKCAP17252 672 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 PGCP20142 388 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 MRPL19P49406 292 aaKnown RBP15.86■□□□□ 0.13
HDAC4-211ENST00000494800 SKP2Q13309 424 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 NDUFAF6Q330K2 333 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 AP1ARQ63HQ0 302 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 HBMQ6B0K9 141 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 GTF2IRD2BQ6EKJ0 949 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 GTF2IRD2Q86UP8 949 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 TMEM200AQ86VY9 491 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 OR9I1Q8NGQ6 314 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 POC1BQ8TC44 478 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 PNPT1Q8TCS8 783 aaKnown RBP15.86■□□□□ 0.13
HDAC4-211ENST00000494800 ZFP90Q8TF47 636 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 VPS33AQ96AX1 596 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 KLHL15Q96M94 604 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 RAD21L1Q9H4I0 556 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 RABEP2Q9H5N1 569 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 CACYBPQ9HB71 228 aaKnown RBP15.86■□□□□ 0.13
HDAC4-211ENST00000494800 SERINC1Q9NRX5 453 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-211ENST00000494800 TMEM45AQ9NWC5 275 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 CALML5Q9NZT1 146 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 P2RX2Q9UBL9 471 aa15.86■□□□□ 0.13
HDAC4-211ENST00000494800 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 TNFSF11O14788 317 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 MSTNO14793 375 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 OIP5O43482 229 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 TNFSF13O75888 250 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 SMNDC1O75940 238 aaKnown RBP eCLIP15.85■□□□□ 0.13
HDAC4-211ENST00000494800 SASH3O75995 380 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 SFTPDP35247 375 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 CRATP43155 626 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 CARD18P57730 90 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 CHRNEQ04844 493 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 SELENBP1Q13228 472 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 QPRTQ15274 297 aa15.85■□□□□ 0.13
HDAC4-211ENST00000494800 FRRS1Q6ZNA5 592 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms