RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 ZNF416Q9BWM5 594 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 GATA5Q9BWX5 397 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-206ENST00000494486 ZNF442Q9H7R0 627 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 ZNF275Q9NSD4 429 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-206ENST00000494486 MED17Q9NVC6 651 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 C1RLQ9NZP8 487 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 CTNNAL1Q9UBT7 734 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 UTS2RQ9UKP6 389 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 CES1P1Q9UKY3 287 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 ICAM5Q9UMF0 924 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 TSC22D4Q9Y3Q8 395 aa9.41□□□□□ -0.9
TRIM59-206ENST00000494486 IGHV3-15A0A0B4J1V0 119 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 CCDC151A5D8V7 595 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 NCF1BA6NI72 391 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 NCF1CA8MVU1 366 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 CCDC188H7C350 402 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 PIP5K1BO14986 540 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 PIP5K1CO60331 668 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 DEAF1O75398 565 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ERLIN1O75477 346 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ERAL1O75616 437 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 GBAP04062 536 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 NCF1P14598 390 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 EPORP19235 508 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 PAX7P23759 505 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ELK4P28324 431 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 EIF1P41567 113 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 HSPA7P48741 367 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 UBASH3AP57075 661 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 PHEXP78562 749 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 MRPS35P82673 323 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 SLC25A3Q00325 362 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 TGFBR3Q03167 851 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 TGFBIQ15582 683 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 TSNQ15631 228 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ERCC6LQ2NKX8 1250 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 TMEM176BQ3YBM2 270 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 CDKL4Q5MAI5 379 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 FAM45BPQ6NSW5 357 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 SLC48A1Q6P1K1 146 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 GALNT18Q6P9A2 607 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ADGRG3Q86Y34 549 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 NUP37Q8NFH4 326 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 FAM45AQ8TCE6 357 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ZNF675Q8TD23 568 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 CKAP2Q8WWK9 683 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 SLC9A6Q92581 669 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 MTERF1Q99551 399 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 OCSTAMPQ9BR26 566 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 MS4A7Q9GZW8 240 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 TPK1Q9H3S4 243 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 ASH2LQ9UBL3 628 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 MALT1Q9UDY8 824 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
TRIM59-206ENST00000494486 PSME2Q9UL46 239 aa9.4□□□□□ -0.9
TRIM59-206ENST00000494486 IGHV1-18A0A0C4DH31 117 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 TCRBV7S3A2A0A539 114 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 C1orf226A1L170 272 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 KLF11O14901 512 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 ITGA5P08648 1049 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 FAM157BP0CG42 384 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 ZNF37AP17032 561 aaPredicted RBP9.39□□□□□ -0.91
TRIM59-206ENST00000494486 GP5P40197 560 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 PSMD4P55036 377 aaKnown RBP9.39□□□□□ -0.91
TRIM59-206ENST00000494486 RELBQ01201 579 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 LTB4RQ15722 352 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 DECR1Q16698 335 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 KLHL22Q53GT1 634 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 SULT1C3Q6IMI6 304 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 KLHL24Q6TFL4 600 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 LRRC70Q7Z2Q7 622 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 ESAMQ96AP7 390 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 SLC38A2Q96QD8 506 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 MS4A5Q9H3V2 200 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 OXSMQ9NWU1 459 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 EMC3Q9P0I2 261 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 DCTN4Q9UJW0 460 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 PCDHA9Q9Y5H5 950 aa9.39□□□□□ -0.91
TRIM59-206ENST00000494486 HEATR1Q9H583 2144 aaKnown RBP9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PPIAL4EA0A075B759 164 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PPIAL4CA0A0B4J2A2 164 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PPIAL4DF5H284 164 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PDLIM1O00151 329 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 ZNF195O14628 629 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 CCNT2O60583 730 aaKnown RBP9.38□□□□□ -0.91
TRIM59-206ENST00000494486 GUCY1B2O75343 617 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 NME6O75414 186 aaPredicted RBP9.38□□□□□ -0.91
TRIM59-206ENST00000494486 HPXP02790 462 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PPIAL4FP0DN26 164 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 MLNP12872 115 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 THBS4P35443 961 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 FOXG1P55316 489 aaPredicted RBP9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PROK1P58294 105 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PSG6Q00889 435 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 SNX1Q13596 522 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 PDK3Q15120 406 aa9.38□□□□□ -0.91
TRIM59-206ENST00000494486 FBXO48Q5FWF7 155 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms