RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SH3BP4Q9P0V3 963 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 SLC17A7Q9P2U7 560 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.33□□□□□ -1.24
RIF1-211ENST00000494333 BAIAP2L1Q9UHR4 511 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 C19orf53Q9UNZ5 99 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 V9GYY5 206 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 EML6Q6ZMW3 1958 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 NBPF19A0A087WUL8 3843 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 TMEM233B4DJY2 109 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 NPIPB8E9PQR5 432 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 AKAP10O43572 662 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 SNUPNO95149 360 aaKnown RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 SLU7O95391 586 aaKnown RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 ACTL6AO96019 429 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 CYP4B1P13584 511 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 CREB1P16220 341 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 ZNF20P17024 532 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 BMP5P22003 454 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 GCKP35557 465 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 TIMP3P35625 211 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 RFX3P48380 749 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 PSPHP78330 225 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 MRPS22P82650 360 aaKnown RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 SRYQ05066 204 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 ZNF155Q12901 538 aaPredicted RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 HSPB3Q12988 150 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 GAB1Q13480 694 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 SLC25A35Q3KQZ1 300 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 UGT3A2Q3SY77 523 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 GALNTL6Q49A17 601 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 ACSF3Q4G176 576 aaPredicted RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 DCST1Q5T197 706 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 WDR93Q6P2C0 686 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 EMBQ6PCB8 327 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 ZCCHC23Q6ZST2 131 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 ZNF551Q7Z340 670 aaPredicted RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 LACC1Q8IV20 430 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 OR2L13Q8N349 312 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 NAXEQ8NCW5 288 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 AGR3Q8TD06 166 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 AENQ8WTP8 325 aaKnown RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 PPCDCQ96CD2 204 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 TSSK3Q96PN8 268 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 BCO1Q9HAY6 547 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 EML4Q9HC35 981 aaKnown RBP7.32□□□□□ -1.24
RIF1-211ENST00000494333 MCCC2Q9HCC0 563 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 Q9N2J8 555 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 TAS2R10Q9NYW0 307 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 LGALS13Q9UHV8 139 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 FBXL2Q9UKC9 423 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 ITGB1BP2Q9UKP3 347 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 WIF1Q9Y5W5 379 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 CREBBPQ92793 2442 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 NINQ8N4C6 2090 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 DNAJC13O75165 2243 aa7.32□□□□□ -1.24
RIF1-211ENST00000494333 CD8B2A6NJW9 211 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 SYT5O00445 386 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 PIP5K1BO14986 540 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 LSM1O15116 133 aaKnown RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 SCO2O43819 266 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 ZIC3O60481 467 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 PEX11AO75192 247 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 PRPS2P11908 318 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 NEFHP12036 1026 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CPN1P15169 458 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 SDC1P18827 310 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CAPN3P20807 821 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 TCEA1P23193 301 aaKnown RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 SRD5A2P31213 254 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CEACAM8P31997 349 aaPredicted RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 GABRA3P34903 492 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 STARP49675 285 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 AGFG1P52594 562 aaKnown RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 PRKAG1P54619 331 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 GAS1P54826 345 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 DLX5P56178 289 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 RPL38P63173 70 aaKnown RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 MYBPHQ13203 477 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 SNTB1Q13884 538 aaKnown RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 RCAN2Q14206 197 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 ZNHIT3Q15649 155 aaPredicted RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 DECR1Q16698 335 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CES4AQ5XG92 561 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 NSUN5P2Q63ZY6 315 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 ENPP6Q6UWR7 440 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 RNF165Q6ZSG1 346 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 IFNEQ86WN2 208 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 PQLC1Q8N2U9 271 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CLHC1Q8NHS4 586 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 ZPLD1Q8TCW7 415 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 TWIST2Q8WVJ9 160 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 CAVIN3Q969G5 261 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CIDECQ96AQ7 238 aaPredicted RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 FCRL1Q96LA6 429 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 CCT7Q99832 543 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 ZNF559Q9BR84 538 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 LMF2Q9BU23 707 aaKnown RBP7.31□□□□□ -1.24
RIF1-211ENST00000494333 PARD6BQ9BYG5 372 aa7.31□□□□□ -1.24
RIF1-211ENST00000494333 OR2B2Q9GZK3 357 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms