RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NCEH1Q6PIU2 408 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SERPINA13PQ6UXR4 307 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NPSR1Q6W5P4 371 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ARMCX2Q7L311 632 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 HIST3H2AQ7L7L0 130 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SLC5A8Q8N695 610 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 RASGEF1AQ8N9B8 481 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR5B17Q8NGF7 314 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR51S1Q8NGJ8 323 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR1J4Q8NGS1 313 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 GNPDA2Q8TDQ7 276 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 PXYLP1Q8TE99 480 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SELENOMQ8WWX9 145 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 HIST1H2ACQ93077 130 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MRGPRX4Q96LA9 322 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF385AQ96PM9 386 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZDHHC5Q9C0B5 715 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 HRH4Q9H3N8 390 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 GAL3ST2Q9H3Q3 398 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NSUN3Q9H649 340 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NDUFB11Q9NX14 153 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF226Q9NYT6 803 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZIM2Q9NZV7 527 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 PTGFRNQ9P2B2 879 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR14J1Q9UGF5 321 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 PIKFYVEQ9Y2I7 2098 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 E7EQ34 232 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 F5H5P2 479 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PEX12O00623 359 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 GOSR2O14653 212 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TPST2O60704 377 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 GJB1P08034 283 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 SRPRAP08240 638 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 BCKDHAP12694 445 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 FGF7P21781 194 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ITPKAP23677 461 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RBM34P42696 430 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MRPL19P49406 292 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CSNK1EP49674 416 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF84P51523 738 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TLE4Q04727 773 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 LMAN2Q12907 356 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR5I1Q13606 314 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ARHGAP19Q14CB8 494 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 SEZ6Q53EL9 994 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZRANB3Q5FWF4 1079 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 NSUN5P2Q63ZY6 315 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CXorf57Q6NSI4 855 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF705AQ6ZN79 300 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF546Q86UE3 836 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 FAM185AQ8N0U4 392 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 LGI4Q8N135 537 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM130Q8N3G9 435 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 NUBPLQ8TB37 319 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 WDR89Q96FK6 387 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 HSH2DQ96JZ2 352 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF75AQ96N20 296 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR52E6Q96RD3 313 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CYP2S1Q96SQ9 504 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 IKZF5Q9H5V7 419 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 FN3KRPQ9HA64 309 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 NOX3Q9HBY0 568 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM161AQ9NX61 479 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MIA3Q5JRA6 1907 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CD8B2A6NJW9 211 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PGRMC2O15173 223 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PRKYO43930 277 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR10H3O60404 316 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 FMO6PO60774 539 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ENTPD6O75354 484 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 NSA2O95478 260 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CST3P01034 146 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 USP17L7P0C7H9 530 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CD8BP10966 210 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ELNP15502 786 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 BPIP17213 487 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 AGAP20933 346 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ITGB7P26010 798 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PCGF2P35227 344 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RAD52P43351 418 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 FKBP1BP68106 108 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 IRF8Q02556 426 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MLLT11Q13015 90 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MORN1Q5T089 497 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 IL27RAQ6UWB1 636 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 UBE2R2Q712K3 238 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 HIST2H3AQ71DI3 136 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CAMKMTQ7Z624 323 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM135Q86UB9 458 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 VRK3Q8IV63 474 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 GLB1L2Q8IW92 636 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF567Q8N184 647 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 BPIFB2Q8N4F0 458 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MDGA1Q8NFP4 955 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR8J2Q8NGG1 315 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR14K1Q8NGZ2 314 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PROKR1Q8TCW9 393 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 HAVCR2Q8TDQ0 301 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR8D1Q8WZ84 308 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms