RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CBFBQ13951 182 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 MAPK11Q15759 364 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 TRMT5Q32P41 509 aaKnown RBP11.56□□□□□ -0.56
CLIP2-209ENST00000493166 ACSF3Q4G176 576 aaPredicted RBP11.56□□□□□ -0.56
CLIP2-209ENST00000493166 RUNDC3AQ59EK9 446 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 COQ5Q5HYK3 327 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 RPS26P11Q5JNZ5 115 aaPredicted RBP11.56□□□□□ -0.56
CLIP2-209ENST00000493166 REP15Q6BDI9 236 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 RTL6Q6ICC9 239 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 ZNF808Q8N4W9 903 aaPredicted RBP11.56□□□□□ -0.56
CLIP2-209ENST00000493166 OR5W2Q8NH69 310 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 SMPDL3BQ92485 455 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 RND1Q92730 232 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 MAL2Q969L2 176 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 RNF145Q96MT1 663 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 ANKRD27Q96NW4 1050 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 CGREF1Q99674 301 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 TREX2Q9BQ50 279 aaPredicted RBP11.56□□□□□ -0.56
CLIP2-209ENST00000493166 KLHDC3Q9BQ90 382 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 TTYH2Q9BSA4 534 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 LAT2Q9GZY6 243 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 IKZF5Q9H5V7 419 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 COQ3Q9NZJ6 369 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 STOML1Q9UBI4 398 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 ZNF337Q9Y3M9 751 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 DSPPQ9NZW4 1301 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 MAST4O15021 2626 aa11.56□□□□□ -0.56
CLIP2-209ENST00000493166 HCFC1P51610 2035 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 A0A0G2JPF8 293 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 LOC100653049A0A140TA62 436 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 CLDN24A6NM45 220 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 HNRNPCL3B7ZW38 293 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 MRASO14807 208 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 SEC14L5O43304 696 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 SNX3O60493 162 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 KRT34O76011 436 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 LINGO3P0C6S8 592 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 HNRNPCL4P0DMR1 293 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 GLI4P10075 376 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 ARAFP10398 606 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 NID1P14543 1247 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 ZNF708P17019 499 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 GPX2P18283 190 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 RPS4Y1P22090 263 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 PGM1P36871 562 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 EIF1P41567 113 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 CLDN18P56856 261 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 MTPNP58546 118 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 KCNJ10P78508 379 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 FOXF1Q12946 379 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 CYLC2Q14093 348 aaPredicted RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 CAPRIN1Q14444 709 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 BCL2A1Q16548 175 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 TMEM44Q2T9K0 475 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 XKRXQ6PP77 449 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 MTDHQ86UE4 582 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 LACC1Q8IV20 430 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 CMIPQ8IY22 773 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 UBQLNLQ8IYU4 475 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 C10orf111Q8N326 155 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 GTPBP8Q8N3Z3 284 aaPredicted RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 PCYOX1LQ8NBM8 494 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 FAM71CQ8NEG0 241 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 OR10Q1Q8NGQ4 319 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 NFKBIDQ8NI38 313 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 BBS10Q8TAM1 723 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 ZPLD1Q8TCW7 415 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 GPR119Q8TDV5 335 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 PSMG3-AS1Q96PY0 264 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 TRIB1Q96RU8 372 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 TUBA1CQ9BQE3 449 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 THUMPD3Q9BV44 507 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 TRIM8Q9BZR9 551 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 AP4B1Q9Y6B7 739 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 INTS1Q8N201 2190 aaKnown RBP11.55□□□□□ -0.56
CLIP2-209ENST00000493166 MPDZO75970 2070 aa11.55□□□□□ -0.56
CLIP2-209ENST00000493166 ADGRG4Q8IZF6 3080 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 BCAS1O75363 584 aaPredicted RBP11.54□□□□□ -0.56
CLIP2-209ENST00000493166 EPPINO95925 133 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 PGCP20142 388 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 AGAP20933 346 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 ME2P23368 584 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 CDK6Q00534 326 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 LARS2Q15031 903 aaKnown RBP11.54□□□□□ -0.56
CLIP2-209ENST00000493166 QPRTQ15274 297 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 TOMM34Q15785 309 aaPredicted RBP11.54□□□□□ -0.56
CLIP2-209ENST00000493166 CYP51A1Q16850 503 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 LIN52Q52LA3 116 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 MRPL2Q5T653 305 aaKnown RBP11.54□□□□□ -0.56
CLIP2-209ENST00000493166 PRAMEF8Q5VWM4 474 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 PRAMEF7Q5VXH5 474 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 NSUN5P2Q63ZY6 315 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 CHMP1BQ7LBR1 199 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 METTL25Q8N6Q8 603 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 POU5F2Q8N7G0 328 aa11.54□□□□□ -0.56
CLIP2-209ENST00000493166 SDCCAG3Q96C92 435 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms