RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 PPA1Q15181 289 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 Q6ZT83 130 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 TDRPQ86YL5 185 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 ARIH2OSQ8N7S6 290 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 COX18Q8N8Q8 333 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 OR2W6PQ8NHA6 318 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 CEP70Q8NHQ1 597 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 CLHC1Q8NHS4 586 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 PHOSPHO1Q8TCT1 267 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 MS4A4EQ96PG1 132 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 ZNF300Q96RE9 604 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-204ENST00000493161 FMO2Q99518 471 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 CACNG6Q9BXT2 260 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 ANKZF1Q9H8Y5 726 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
SAMM50-204ENST00000493161 TIGARQ9NQ88 270 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 ICAM5Q9UMF0 924 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 CARD8Q9Y2G2 431 aa12.11□□□□□ -0.47
SAMM50-204ENST00000493161 E7EQL1 145 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 C8BP07358 591 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 ALOX5P09917 674 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 PYGBP11216 843 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 IGHV1-2P23083 117 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 ELK4P28324 431 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 EIF1P41567 113 aaKnown RBP12.1□□□□□ -0.47
SAMM50-204ENST00000493161 FRKP42685 505 aaPredicted RBP12.1□□□□□ -0.47
SAMM50-204ENST00000493161 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.1□□□□□ -0.47
SAMM50-204ENST00000493161 CLEC6AQ6EIG7 209 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 MISPQ8IVT2 679 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 ZNF525Q8N782 197 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 OR2T11Q8NH01 316 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 GPR119Q8TDV5 335 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 ZFP90Q8TF47 636 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 JADE3Q92613 823 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
SAMM50-204ENST00000493161 CDS1Q92903 461 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 PPCDCQ96CD2 204 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 TSSK3Q96PN8 268 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 MANSC1Q9H8J5 431 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 RRAGDQ9NQL2 400 aaPredicted RBP12.1□□□□□ -0.47
SAMM50-204ENST00000493161 SH3BP4Q9P0V3 963 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
SAMM50-204ENST00000493161 ALPK2Q86TB3 2170 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 A0A1W2PR80 420 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 SMAD9O15198 467 aaKnown RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 NUDT14O95848 222 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 FESP07332 822 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 PRKCAP17252 672 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 SDC1P18827 310 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 SERPINB4P48594 390 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 P2RX1P51575 399 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 POU6F2P78424 691 aaPredicted RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 NRF1Q16656 503 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 KLHL26Q53HC5 615 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 AGAP6Q5VW22 663 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 B3GLCTQ6Y288 498 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 Q6ZSR9 355 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 FRMD7Q6ZUT3 714 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 NOA1Q8NC60 698 aaKnown RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 FAM120BQ96EK7 910 aaKnown RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 BTBD2Q9BX70 525 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 BEX2Q9BXY8 128 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 C12orf65Q9H3J6 166 aaKnown RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 REEP4Q9H6H4 257 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 HHATLQ9HCP6 504 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 SIRT3Q9NTG7 399 aaPredicted RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 CDC42EP3Q9UKI2 254 aa12.09□□□□□ -0.47
SAMM50-204ENST00000493161 YLPM1P49750 1951 aaKnown RBP12.09□□□□□ -0.47
SAMM50-204ENST00000493161 ELOA3DA6NLF2 546 aaPredicted RBP12.08□□□□□ -0.48
SAMM50-204ENST00000493161 GJE1A6NN92 205 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 RGS14O43566 566 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 TBX19O60806 448 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 CRCPO75575 148 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 PGM3O95394 542 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 H6PDO95479 791 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 IGHV3-9P01782 118 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 HMGN2P05204 90 aaKnown RBP12.08□□□□□ -0.48
SAMM50-204ENST00000493161 PRPH2P23942 346 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 LCN1P31025 176 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 TTKP33981 857 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 VLDLRP98155 873 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 RASGEF1BQ0VAM2 473 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 PDE7AQ13946 482 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.48
SAMM50-204ENST00000493161 ELOA3BQ3SY89 546 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 RFTN2Q52LD8 501 aaPredicted RBP12.08□□□□□ -0.48
SAMM50-204ENST00000493161 CLEC2AQ6UVW9 174 aa12.08□□□□□ -0.48
SAMM50-204ENST00000493161 ZYG11AQ6WRX3 759 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms