RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 VIMP08670 466 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 NR2F1P10589 423 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 ETFAP13804 333 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 PPIBP23284 216 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 ME2P23368 584 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 PSMA4P25789 261 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 GRNP28799 593 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 MDH1P40925 334 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 CRISP3P54108 245 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 DSTNP60981 165 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 RAC1P63000 192 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 EEF1A1P68104 462 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 CHRNEQ04844 493 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 TFF3Q07654 80 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 SKP2Q13309 424 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 MAPK14Q16539 360 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 SYPL1Q16563 259 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF787Q6DD87 383 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 HIST2H2BCQ6DN03 193 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 OR2A2Q6IF42 318 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 OLIG3Q7RTU3 272 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 GGNQ86UU5 652 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 GRAMD2AQ8IUY3 354 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 CMIPQ8IY22 773 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 METTL25Q8N6Q8 603 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 ANKFN1Q8N957 763 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 C9orf106Q8NAJ2 232 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 NAXEQ8NCW5 288 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 FAM71CQ8NEG0 241 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 GPR119Q8TDV5 335 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 AURKBQ96GD4 344 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 MRGPRX4Q96LA9 322 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 RNF145Q96MT1 663 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 SLC38A1Q9H2H9 487 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 MTHFD2LQ9H903 347 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 EXOSC3Q9NQT5 275 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 LEF1Q9UJU2 399 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 CORO2BQ9UQ03 480 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF175Q9Y473 711 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 GMEB1Q9Y692 573 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 PCNX3Q9H6A9 2034 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 KIAA1549Q9HCM3 1950 aa9.61□□□□□ -0.87
CDC42SE1-206ENST00000492796 DSPPQ9NZW4 1301 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PCNX1Q96RV3 2341 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 HCFC1P51610 2035 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 NKX2-6A6NCS4 301 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 AGAP5A6NIR3 686 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 SLC22A20A6NK97 555 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 GJE1A6NN92 205 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 SHISA8B8ZZ34 492 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 C19orf84I3L1E1 186 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CLIC1O00299 241 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ANGPT2O15123 496 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 SEC14L5O43304 696 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 OIP5O43482 229 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 BCHEP06276 602 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CRHP06850 196 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 DBIP07108 87 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 UBTFL6P0CB48 400 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 TMIGD3P0DMS9 266 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 FCGR2AP12318 317 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 BMP2P12643 396 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 COX6B1P14854 86 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PRKCAP17252 672 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PGCP20142 388 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 BMP5P22003 454 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 RPS4Y1P22090 263 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CTSSP25774 331 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 OPRM1P35372 400 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PGM1P36871 562 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ASCL1P50553 236 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CCR4P51679 360 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF136P52737 540 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ARFIP2P53365 341 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 SUCLG1P53597 346 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CLDN15P56746 228 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CLDN20P56880 219 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 FOXF1Q12946 379 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 QPRTQ15274 297 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 RGNQ15493 299 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 NDUFAF6Q330K2 333 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 SLC25A53Q5H9E4 307 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PAGE3Q5JUK9 113 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PRAMEF8Q5VWM4 474 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 PRAMEF7Q5VXH5 474 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 CGB2Q6NT52 195 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 LIX1LQ8IVB5 337 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 MSRB3Q8IXL7 192 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ACBD4Q8NC06 268 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 POC1BQ8TC44 478 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 WDR60Q8WVS4 1066 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 TMEM234Q8WY98 164 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 ST8SIA1Q92185 356 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 SMPDL3BQ92485 455 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 LRRC46Q96FV0 321 aa9.6□□□□□ -0.87
CDC42SE1-206ENST00000492796 DOCK7Q96N67 2140 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms