RNA–Protein interactions for RNA: ENST00000491553.1

TBC1D1-212, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-212ENST00000491553 CUL3Q13618 768 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CPSF6Q16630 551 aaKnown RBP eCLIP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TUSC1Q2TAM9 212 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 BEAN1Q3B7T3 259 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TMEM176BQ3YBM2 270 aaPredicted RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 VAX1Q5SQQ9 334 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 HP1BP3Q5SSJ5 553 aaPredicted RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 PDSS1Q5T2R2 415 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CAVIN1Q6NZI2 390 aaKnown RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TTC27Q6P3X3 843 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 UGT2A3Q6UWM9 527 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 RAD9BQ6WBX8 426 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 GALNT7Q86SF2 657 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TRABD2AQ86V40 505 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 ZC3HC1Q86WB0 502 aaKnown RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 ZNF100Q8IYN0 542 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CCDC170Q8IYT3 715 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CDK20Q8IZL9 346 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 BCL6BQ8N143 479 aaPredicted RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 UBE2J2Q8N2K1 259 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TXLNBQ8N3L3 684 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TEX9Q8N6V9 391 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 KIR3DL3Q8N743 410 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CDYL2Q8N8U2 506 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 ZNF675Q8TD23 568 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 ZNF524Q96C55 264 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CERS2Q96G23 380 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CALR3Q96L12 384 aaKnown RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 MRGPRX4Q96LA9 322 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 ZNF48Q96MX3 618 aaPredicted RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CITED1Q99966 193 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 TBL1XR1Q9BZK7 514 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 DERL2Q9GZP9 239 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 RAB1BQ9H0U4 201 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 SEC61A2Q9H9S3 476 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 CAB39LQ9H9S4 337 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 GP6Q9HCN6 339 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 PPANQ9NQ55 473 aaKnown RBP5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 PCDHB14Q9Y5E9 798 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 PLXNB1O43157 2135 aa5.69□□□□□ -1.5
TBC1D1-212ENST00000491553 A0A087WZY1 265 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 IGHV1-18A0A0C4DH31 117 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 SH3PXD2BA1X283 911 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 K7EPI3 171 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 M0QZ24 198 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 UBXN8O00124 270 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 KLF11O14901 512 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 PHGDHO43175 533 aaKnown RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 OIP5O43482 229 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 PIAS1O75925 651 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 KRT14P02533 472 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 TPM3P06753 285 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 RNASE1P07998 156 aaKnown RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 LINGO3P0C6S8 592 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 CD1DP15813 335 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 COL8A2P25067 703 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 PRIM2P49643 509 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 KHKP50053 298 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 RNF144AP50876 292 aaPredicted RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 ZNF41P51814 821 aaPredicted RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 MAPK12P53778 367 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 PRR5P85299 388 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 EFNB3Q15768 340 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 ERCC6LQ2NKX8 1250 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 CDKL4Q5MAI5 379 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 SPANXN3Q5MJ09 141 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 ELFN2Q5R3F8 820 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 CCNYL2Q5T2Q4 361 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 FBXW9Q5XUX1 488 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 ASPHD2Q6ICH7 369 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 CCBE1Q6UXH8 406 aaPredicted RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 DOK3Q7L591 496 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 SSX8Q7RTT4 187 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 COMMD6Q7Z4G1 85 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 ZAR1Q86SH2 424 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 NAT8LQ8N9F0 302 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 OR52E4Q8NGH9 312 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 OR4C3Q8NH37 302 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 FAM110DQ8TAY7 271 aaPredicted RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 WDR20Q8TBZ3 569 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 NEU4Q8WWR8 484 aaPredicted RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 UBE2FQ969M7 185 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 TMIGD2Q96BF3 282 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 TM4SF18Q96CE8 201 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 CFAP36Q96G28 342 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 MUS81Q96NY9 551 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 DOK1Q99704 481 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 NTN4Q9HB63 628 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 TIGARQ9NQ88 270 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 PFDN4Q9NQP4 134 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 SLC17A5Q9NRA2 495 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 KLHL9Q9P2J3 617 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 OPTCQ9UBM4 332 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 RNF14Q9UBS8 474 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 ZNF69Q9UC07 566 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 RNF11Q9Y3C5 154 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 TSC22D4Q9Y3Q8 395 aa5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 SOX21Q9Y651 276 aaPredicted RBP5.68□□□□□ -1.5
TBC1D1-212ENST00000491553 HYDINQ4G0P3 5121 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms