RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MED27Q6P2C8 311 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 CYP20A1Q6UW02 462 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 APOOLQ6UXV4 268 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 FCRLAQ7L513 359 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 GALNT7Q86SF2 657 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 MARCH3Q86UD3 253 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 ZCCHC24Q8N2G6 241 aaKnown RBP6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 WDR31Q8NA23 367 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 TRIM58Q8NG06 486 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 POC1BQ8TC44 478 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 ANKRD49Q8WVL7 239 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 WDR60Q8WVS4 1066 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF75CPQ92670 426 aaPredicted RBP6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 UBE2E3Q969T4 207 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 CPNE4Q96A23 557 aaPredicted RBP6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 KLHL15Q96M94 604 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 RNF145Q96MT1 663 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 MTERF1Q99551 399 aaKnown RBP6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 KLHDC3Q9BQ90 382 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 RAB1BQ9H0U4 201 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 TSPY26PQ9H489 355 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 COQ10BQ9H8M1 238 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 ANKRA2Q9H9E1 313 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 FAM120CQ9NX05 1096 aaKnown RBP6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 ZDHHC2Q9UIJ5 367 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 VWA7Q9Y334 891 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 TSC22D4Q9Y3Q8 395 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 CORINQ9Y5Q5 1042 aa6.15□□□□□ -1.42
PDLIM1-203ENST00000490391 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 A0A087WZY1 265 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 G3V4G9 280 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 CLDN34H7C241 214 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 RGS14O43566 566 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 EFNA2O43921 213 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 MLNP12872 115 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 DDX5P17844 614 aaKnown RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 ENPP1P22413 925 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 KRT20P35900 424 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 FEN1P39748 380 aaKnown RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 KRTAP10-3P60369 221 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 PSPHP78330 225 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 MRPS22P82650 360 aaKnown RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 RASGEF1BQ0VAM2 473 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 ZP4Q12836 540 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 CSTF3Q12996 717 aaKnown RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 GABRA6Q16445 453 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 TSNAXIP1Q2TAA8 658 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 PLPPR5Q32ZL2 321 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 CPTPQ5TA50 214 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 C11orf87Q6NUJ2 197 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC48A1Q6P1K1 146 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 C4orf22Q6V702 233 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 FRA10AC1Q70Z53 315 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 NUDT13Q86X67 352 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 TCAIMQ8N3R3 496 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 UBL4BQ8N7F7 174 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 TOR1AIP2Q8NFQ8 470 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 NANPQ8TBE9 248 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 NEU4Q8WWR8 484 aaPredicted RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 UBE2FQ969M7 185 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF48Q96MX3 618 aaPredicted RBP6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF681Q96N22 645 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 MUS81Q96NY9 551 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 CENPKQ9BS16 269 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 NARFLQ9H6Q4 476 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 SDHAF3Q9NRP4 125 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 CA10Q9NS85 328 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 TREM2Q9NZC2 230 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 OPN4Q9UHM6 478 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 FRAS1Q86XX4 4008 aa6.14□□□□□ -1.43
PDLIM1-203ENST00000490391 IGHV3-15A0A0B4J1V0 119 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 A0A0G2JMP0 313 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 A0A0X1KG70 313 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 A0A1W2PRB8 838 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC22A31A6NKX4 558 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 MIF4GDA9UHW6 222 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 C9JVG2 144 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 PDLIM1O00151 329 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 TIMM23O14925 209 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 GMFGO60234 142 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 ERAL1O75616 437 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 IL33O95760 270 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 ANGPTL1O95841 491 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 ITGA5P08648 1049 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 OR4A8P0C604 315 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SAGP10523 405 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 OMGP23515 440 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 PTX3P26022 381 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SFTPDP35247 375 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 TERF1P54274 439 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 NAP1L1P55209 391 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 PSG6Q00889 435 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 C17orf67Q0P5P2 114 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 CUL3Q13618 768 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 CRYMQ14894 314 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 CDKL4Q5MAI5 379 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 TCHHL1Q5QJ38 904 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms