RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
CCDC39-206ENST00000489868 DBNDD1Q9H9R9 158 aa3.2□□□□□ -1.9
CCDC39-206ENST00000489868 B3GNT2Q9NY97 397 aa3.2□□□□□ -1.9
CCDC39-206ENST00000489868 MRPL39Q9NYK5 338 aaKnown RBP3.2□□□□□ -1.9
CCDC39-206ENST00000489868 ATXN10Q9UBB4 475 aa3.2□□□□□ -1.9
CCDC39-206ENST00000489868 SCML2Q9UQR0 700 aa3.2□□□□□ -1.9
CCDC39-206ENST00000489868 IFT52Q9Y366 437 aa3.2□□□□□ -1.9
CCDC39-206ENST00000489868 PLEKHG1Q9ULL1 1385 aa3.2□□□□□ -1.9
CCDC39-206ENST00000489868 RSPH10B2B2RC85 870 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 STX7O15400 261 aaKnown RBP3.19□□□□□ -1.9
CCDC39-206ENST00000489868 AKR7A3O95154 331 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 F10P00742 488 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 IGF1P05019 195 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 RSPH10BP0C881 870 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 SERPINA2P20848 420 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 PAICSP22234 425 aaKnown RBP3.19□□□□□ -1.9
CCDC39-206ENST00000489868 DNAJB1P25685 340 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 HTR1EP28566 365 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 ADRA1AP35348 466 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 OSTNP61366 133 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 ATXN7L3Q14CW9 347 aaPredicted RBP3.19□□□□□ -1.9
CCDC39-206ENST00000489868 TRIP10Q15642 601 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 MPPED2Q15777 294 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 NDUFA9Q16795 377 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 AGBL2Q5U5Z8 902 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 RAET1GQ6H3X3 334 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 ACSM5Q6NUN0 579 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 ISLR2Q6UXK2 745 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 UNQ9370/PRO34162Q6UXP9 181 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 SUMF2Q8NBJ7 301 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 HPDLQ96IR7 371 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 HSD3B7Q9H2F3 369 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 ECT2Q9H8V3 914 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 ZDHHC11Q9H8X9 412 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 KLK12Q9UKR0 248 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 B9D1Q9UPM9 204 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 CDH10Q9Y6N8 788 aa3.19□□□□□ -1.9
CCDC39-206ENST00000489868 A0A1B0GWB2 263 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 SEC22BO75396 215 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 BBOX1O75936 387 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 B3GAT3O94766 335 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 OPN1LWP04000 364 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 THRBP10828 461 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 TOP1P11387 765 aaKnown RBP3.18□□□□□ -1.9
CCDC39-206ENST00000489868 HPDP32754 393 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-206ENST00000489868 EPHX2P34913 555 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 RPS10P46783 165 aaKnown RBP3.18□□□□□ -1.9
CCDC39-206ENST00000489868 OR9A1PQ8NGU1 263 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 PAQR8Q8TEZ7 354 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 OR1E3Q8WZA6 343 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 RPUSD4Q96CM3 377 aaKnown RBP3.18□□□□□ -1.9
CCDC39-206ENST00000489868 FAM111AQ96PZ2 611 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 OR5B2Q96R09 309 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 SLC30A2Q9BRI3 323 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 RSPH9Q9H1X1 276 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-206ENST00000489868 VAT1LQ9HCJ6 419 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 NGBQ9NPG2 151 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 MMP26Q9NRE1 261 aa3.18□□□□□ -1.9
CCDC39-206ENST00000489868 PIN4Q9Y237 131 aaKnown RBP3.18□□□□□ -1.9
CCDC39-206ENST00000489868 RNF103-CHMP3A0A140T963 221 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 TMEM110-MUSTN1A8MSY1 372 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 RASGRF2O14827 1237 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 VPS26AO75436 327 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 DPP4P27487 766 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 HOXD10P28358 340 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 AXLP30530 894 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 ATP6V1E1P36543 226 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 TIMM10P62072 90 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 HSF2Q03933 536 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 EBI3Q14213 229 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 RBM43Q6ZSC3 357 aaKnown RBP3.17□□□□□ -1.9
CCDC39-206ENST00000489868 TMEM110Q86TL2 294 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 NEIL3Q8TAT5 605 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 PINX1Q96BK5 328 aaKnown RBP3.17□□□□□ -1.9
CCDC39-206ENST00000489868 MS4A14Q96JA4 679 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 VPS35Q96QK1 796 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 MBOAT4Q96T53 435 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 NRTNQ99748 197 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 MAGT1Q9H0U3 335 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 NARFLQ9H6Q4 476 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 POLD4Q9HCU8 107 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 APMAPQ9HDC9 416 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 SH2D2AQ9NP31 389 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 RDH8Q9NYR8 311 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 MGAT4BQ9UQ53 548 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 ARHGAP21Q5T5U3 1957 aa3.17□□□□□ -1.9
CCDC39-206ENST00000489868 A0A0G2JRQ6 117 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 A0A1B0GUA9 196 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 HCN1O60741 890 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CLUP10909 449 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CD80P33681 288 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 NUDT1P36639 197 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CAMLGP49069 296 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 PPOXP50336 477 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CUL1Q13616 776 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 MAPK6Q16659 721 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 LIPNQ5VXI9 398 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 CYB5R2Q6BCY4 276 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 NIPAL3Q6P499 406 aa3.16□□□□□ -1.9
CCDC39-206ENST00000489868 WDR74Q6RFH5 385 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms