RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 H0YAE9 185 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 DENRO43583 198 aaKnown RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 FADS1O60427 444 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 EIF4E2O60573 245 aaKnown RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 MITFO75030 526 aaPredicted RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 ANGPTL1O95841 491 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 NUDT14O95848 222 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 CBLP22681 906 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 ITPKBP27987 946 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 NUP214P35658 2090 aaPredicted RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 SOX3P41225 446 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 ZNF117Q03924 483 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 KCNAB2Q13303 367 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 SEC23BQ15437 767 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 TTC23Q5W5X9 447 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 ANKRD34AQ69YU3 496 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 FCRLBQ6BAA4 426 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 DESI1Q6ICB0 168 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 JMJD6Q6NYC1 403 aaPredicted RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 APOOLQ6UXV4 268 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 APLFQ8IW19 511 aaPredicted RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 TMEM156Q8N614 296 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 DNAJA4Q8WW22 397 aaPredicted RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 ACOT11Q8WXI4 607 aaPredicted RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 TFAP2CQ92754 450 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 HGDQ93099 445 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 GTPBP3Q969Y2 492 aaKnown RBP9.18□□□□□ -0.94
USP11-211ENST00000489111 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 FUZQ9BT04 418 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 ANKRD60Q9BZ19 345 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 UCK2Q9BZX2 261 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 LAT2Q9GZY6 243 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 CDCP1Q9H5V8 836 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 A0A0B4J2E0 115 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 A0A1B0GX12 115 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 DLGAP1O14490 977 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 BCKDKO14874 412 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 OIP5O43482 229 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 CHP2O43745 196 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ZNF354AO60765 605 aaPredicted RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 OR6B1O95007 311 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 POU2F1P14859 743 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 LIFP15018 202 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 PGCP20142 388 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 FUT4P22083 530 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ACAA2P42765 397 aaKnown RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 MLF1P58340 268 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ALDH6A1Q02252 535 aaKnown RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 CHAF1BQ13112 559 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 RTP5Q14D33 572 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 PDK3Q15120 406 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 TGIF1Q15583 401 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 NTRK2Q16620 822 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 SLC36A3Q495N2 470 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ALG10BQ5I7T1 473 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 WBP2NLQ6ICG8 309 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ZNF770Q6IQ21 691 aaPredicted RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 PGBD2Q6P3X8 592 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ULK3Q6PHR2 472 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 LYPD8Q6UX82 237 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 MBOAT2Q6ZWT7 520 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 VASH2Q86V25 355 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 CHERPQ8IWX8 916 aaKnown RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 SIRT6Q8N6T7 355 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 LSMEM1Q8N8F7 131 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 CLEC1AQ8NC01 280 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 OR10G3Q8NGC4 313 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 B4GALNT2Q8NHY0 566 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ZNF563Q8TA94 476 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ADAMTS17Q8TE56 1095 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 TMEM255BQ8WV15 326 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ARSGQ96EG1 525 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 THOC3Q96J01 351 aaKnown RBP9.17□□□□□ -0.94
USP11-211ENST00000489111 MPP4Q96JB8 637 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 FER1L6-AS2Q96M78 137 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 NODALQ96S42 347 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 NIPSNAP1Q9BPW8 284 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 DGCR6LQ9BY27 220 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 SDHAF3Q9NRP4 125 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 FAM118AQ9NWS6 357 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 HPF1Q9NWY4 346 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 ABI3Q9P2A4 366 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 TEKT2Q9UIF3 430 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 FER1L5A0AVI2 2057 aa9.17□□□□□ -0.94
USP11-211ENST00000489111 A0A087WUU8 490 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ELOA3DA6NLF2 546 aaPredicted RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 MASP2O00187 686 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 GMFGO60234 142 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ADAM11O75078 769 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 GASTP01350 101 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 THY1P04216 161 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 RPSAP08865 295 aaKnown RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 PNMTP11086 282 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 GP1BBP13224 206 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 GSTM3P21266 225 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 MYF6P23409 242 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 ITGA3P26006 1051 aa9.16□□□□□ -0.94
USP11-211ENST00000489111 RBM34P42696 430 aaKnown RBP9.16□□□□□ -0.94
USP11-211ENST00000489111 IDH2P48735 452 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms