RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ANKRD46Q86W74 232 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 ANKRD42Q8N9B4 389 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 OR6K3Q8NGY3 331 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 FBXO27Q8NI29 283 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 MBD6Q96DN6 1003 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 ALPK1Q96QP1 1244 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 MED18Q9BUE0 208 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 PCDHGB4Q9UN71 923 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 DUXAA6NLW8 204 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 ESPNB1AK53 854 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 C16orf97H3BN30 126 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 ANKRD28O15084 1053 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 SCN2BO60939 215 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 AK1P00568 194 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 TUBBP07437 444 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 LBPP18428 481 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 PHC1P78364 1004 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 TOMM34Q15785 309 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-213ENST00000489045 EXOC3L2Q2M3D2 409 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 PDZK1Q5T2W1 519 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 HHATQ5VTY9 493 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 OLIG3Q7RTU3 272 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 ZNF550Q7Z398 422 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 TMCO5AQ8N6Q1 288 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 RFWD2Q8NHY2 731 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 GPR119Q8TDV5 335 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 OSTF1Q92882 214 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 TESCQ96BS2 214 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 NMUR2Q9GZQ4 415 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 MEAF6Q9HAF1 191 aa20.59■□□□□ 0.89
COL9A3-213ENST00000489045 C6orf203Q9P0P8 240 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-213ENST00000489045 GPC6Q9Y625 555 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-213ENST00000489045 PRSS51A0A1B0GVH4 220 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 SIAH2O43255 324 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 EFNA2O43921 213 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 CPSF4O95639 269 aaKnown RBP20.58■□□□□ 0.89
COL9A3-213ENST00000489045 UBL4AP11441 157 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 ADH6P28332 368 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 CASP9P55211 416 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 RIPPLY3P57055 190 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 GPR68Q15743 365 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 TGIF2LYQ8IUE0 185 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 LRRC34Q8IZ02 419 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 OR51I1Q9H343 314 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 PLSCR4Q9NRQ2 329 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 ZNF226Q9NYT6 803 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 KCNE5Q9UJ90 142 aa20.58■□□□□ 0.89
COL9A3-213ENST00000489045 FLNAP21333 2647 aaKnown RBP20.58■□□□□ 0.89
COL9A3-213ENST00000489045 DEFB108AA8MXU0 73 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF195O14628 629 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF264O43296 627 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 PRKCAP17252 672 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 CRYGSP22914 178 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 CCR4P51679 360 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 CLNS1AP54105 237 aaKnown RBP20.57■□□□□ 0.88
COL9A3-213ENST00000489045 CARD18P57730 90 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF239Q16600 458 aaKnown RBP20.57■□□□□ 0.88
COL9A3-213ENST00000489045 DEFB113Q30KQ7 82 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 ARHGAP11BQ3KRB8 267 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 SPANXN4Q5MJ08 99 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 ANXA8L1Q5VT79 327 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 C16orf62Q7Z3J2 963 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 VPS37AQ8NEZ2 397 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 TOR1AIP2Q8NFQ8 470 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF524Q96C55 264 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 TMUB1Q9BVT8 246 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 KLHL4Q9C0H6 718 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 GLRX2Q9NS18 164 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 MKLN1Q9UL63 735 aa20.57■□□□□ 0.88
COL9A3-213ENST00000489045 CENPVL1A0A0U1RR11 272 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 TMEM120BA0PK00 339 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 SERINC4A6NH21 518 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 E9PBE3 544 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 EIF4E2O60573 245 aaKnown RBP20.56■□□□□ 0.88
COL9A3-213ENST00000489045 FCMRO60667 390 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 STX11O75558 287 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ALDOCP09972 364 aaKnown RBP20.56■□□□□ 0.88
COL9A3-213ENST00000489045 CD99P14209 185 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 UQCRC2P22695 453 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 WDR4P57081 412 aaKnown RBP20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF141Q15928 474 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 DPY19L1Q2PZI1 675 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ANKRD34AQ69YU3 496 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 HEPHL1Q6MZM0 1159 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 OGFOD2Q6N063 350 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ATP6V1C2Q8NEY4 427 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 OR5W2Q8NH69 310 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 MIPOL1Q8TD10 442 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ROBO4Q8WZ75 1007 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ZC3HAV1LQ96H79 300 aaKnown RBP20.56■□□□□ 0.88
COL9A3-213ENST00000489045 MRGPRX4Q96LA9 322 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 SRXN1Q9BYN0 137 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF350Q9GZX5 532 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 EXD2Q9NVH0 621 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ZNF469Q96JG9 3925 aaPredicted RBP20.56■□□□□ 0.88
COL9A3-213ENST00000489045 ACANP16112 2415 aa20.56■□□□□ 0.88
COL9A3-213ENST00000489045 GJE1A6NN92 205 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 SDHDO14521 159 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 UGT2B17O75795 530 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 NTN1O95631 604 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms