RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 UGT2B4P06133 528 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 H2AFZP0C0S5 128 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 PPIAL4GP0DN37 164 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CLUP10909 449 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 H2AFXP16104 143 aaPredicted RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 CHI3L1P36222 383 aaPredicted RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 DLSTP36957 453 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 LRRC74AQ0VAA2 488 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 RIPK1Q13546 671 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 RAB35Q15286 201 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CDKN3Q16667 212 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CCDC152Q4G0S7 254 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 MEDAGQ5VYS4 303 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 ASPHD2Q6ICH7 369 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CENPPQ6IPU0 288 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 LEG1Q6P5S2 330 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 BLOC1S2Q6QNY1 142 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CXCL17Q6UXB2 119 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 ZNF562Q6V9R5 426 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 TRPM8Q7Z2W7 1104 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 LHFPL4Q7Z7J7 247 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 GRAMD2AQ8IUY3 354 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 NFAM1Q8NET5 270 aaPredicted RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 OR10H4Q8NGA5 316 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 SHC3Q92529 594 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 AKR1E2Q96JD6 320 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 C4orf36Q96KX1 117 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 NOL4LQ96MY1 436 aaPredicted RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 ZNF607Q96SK3 696 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 DUS2Q9NX74 493 aaKnown RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 RABL2BQ9UNT1 228 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 EIF3LQ9Y262 564 aaKnown RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 RRP15Q9Y3B9 282 aaKnown RBP2.33□□□□□ -2.04
RFC4-213ENST00000489028 OR10H1Q9Y4A9 318 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 AP4B1Q9Y6B7 739 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 NACAE9PAV3 2078 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 PARD3Q8TEW0 1356 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 CCDC7Q96M83 1385 aa2.33□□□□□ -2.04
RFC4-213ENST00000489028 MBLAC1A4D2B0 266 aaPredicted RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 LRRC30A6NM36 301 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 PPIAL4DF5H284 164 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 H0YL77 283 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 SDHDO14521 159 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 ADCY5O95622 1261 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 PDHBP11177 359 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 NR2C1P13056 603 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 RPS2P15880 293 aaKnown RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 CYLC1P35663 651 aaPredicted RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 RBMXP38159 391 aaKnown RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 EMDP50402 254 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 CAV2P51636 162 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 CBX1P83916 185 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 IL24Q13007 206 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 CHIT1Q13231 466 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 ZNF658BQ4V348 819 aaPredicted RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 Q6P435 159 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 IGFL3Q6UXB1 125 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 TMEM184AQ6ZMB5 413 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 Q7L0L9 218 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 LRRC70Q7Z2Q7 622 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 CSNK1A1LQ8N752 337 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 STEAP2Q8NFT2 490 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 PNPT1Q8TCS8 783 aaKnown RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 RAET1EQ8TD07 263 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 TADA1Q96BN2 335 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 UPRTQ96BW1 309 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 CCT7Q99832 543 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 SLC30A2Q9BRI3 323 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 ZSCAN5AQ9BUG6 496 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 NFKBIZQ9BYH8 718 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 DHX33Q9H6R0 707 aaKnown RBP2.32□□□□□ -2.04
RFC4-213ENST00000489028 GORASP2Q9H8Y8 452 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 LRRC40Q9H9A6 602 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 RNF14Q9UBS8 474 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 HPCAL4Q9UM19 191 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 SMC3Q9UQE7 1217 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 L3MBTL1Q9Y468 752 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 MAB21L2Q9Y586 359 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 GRIN2DO15399 1336 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 KDRP35968 1356 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 GTF3C1Q12789 2109 aa2.32□□□□□ -2.04
RFC4-213ENST00000489028 BCAS1O75363 584 aaPredicted RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 UFL1O94874 794 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 MBD3O95983 291 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 IGFBP1P08833 259 aaPredicted RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 CA8P35219 290 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 NF2P35240 595 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 PPT1P50897 306 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 KRTAP10-1P60331 282 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 MECOMQ03112 1051 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 BCL2L1Q07817 233 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 TFDP1Q14186 410 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 SELPLGQ14242 412 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 PDK3Q15120 406 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 FILIP1LQ4L180 1135 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 CYBRD1Q53TN4 286 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 OR2B11Q5JQS5 317 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 SCYL2Q6P3W7 929 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 DPY19L4Q7Z388 723 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms