RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 OIP5O43482 229 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 UTP20O75691 2785 aaKnown RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 UBTFL6P0CB48 400 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 HNRNPCL4P0DMR1 293 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 HOXB9P17482 250 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 ADH6P28332 368 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 RPS3AP61247 264 aaKnown RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 KLF10Q13118 480 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 SKP2Q13309 424 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 NFYCQ13952 458 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 NDUFAF6Q330K2 333 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 CCDC71Q8IV32 467 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 MSRB3Q8IXL7 192 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 CMIPQ8IY22 773 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 METTL25Q8N6Q8 603 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 GPR119Q8TDV5 335 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 WDR60Q8WVS4 1066 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 ZG16BQ96DA0 208 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 ARSGQ96EG1 525 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 RNF145Q96MT1 663 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 PCNX1Q96RV3 2341 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 TM9SF2Q99805 663 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 THUMPD3Q9BV44 507 aaKnown RBP13.6□□□□□ -0.23
CXCL12-207ENST00000488591 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 CHST11Q9NPF2 352 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 ZNF232Q9UNY5 417 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 GMEB1Q9Y692 573 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 HECTD1Q9ULT8 2610 aa13.6□□□□□ -0.23
CXCL12-207ENST00000488591 ASH1LQ9NR48 2969 aaKnown RBP13.59□□□□□ -0.23
CXCL12-207ENST00000488591 COL12A1Q99715 3063 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 TRBV5-3A0A0A0MS03 114 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 A0A0G2JNJ9 132 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 CLCA1A8K7I4 914 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 SLC22A2O15244 555 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 SEC14L5O43304 696 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 CCDC22O60826 627 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 LINGO3P0C6S8 592 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 BMP2P12643 396 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 CD1EP15812 388 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 PGCP20142 388 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 HTR1EP28566 365 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 PGM1P36871 562 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 RAC1P63000 192 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 RUNDC3AQ59EK9 446 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 PDSS1Q5T2R2 415 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 PRAMEF8Q5VWM4 474 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 PRAMEF7Q5VXH5 474 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 DLEU7Q6UYE1 221 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 SPATA21Q7Z572 469 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 CPLX4Q7Z7G2 160 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 HMGN2P46Q86SG4 172 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 GRAMD2AQ8IUY3 354 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 OR52P1PQ8NH57 321 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 LILRB4Q8NHJ6 448 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 C10orf82Q8WW14 230 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 TMEM234Q8WY98 164 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 WNT2BQ93097 391 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 TMEM19Q96HH6 336 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 UCN2Q96RP3 112 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 TREX2Q9BQ50 279 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-207ENST00000488591 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
CXCL12-207ENST00000488591 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
CXCL12-207ENST00000488591 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 RUBCNLQ9H714 662 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 KCNJ16Q9NPI9 418 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 Q9UFV3 132 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 CAPN7Q9Y6W3 813 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 ARHGAP21Q5T5U3 1957 aa13.59□□□□□ -0.23
CXCL12-207ENST00000488591 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
CXCL12-207ENST00000488591 GMNCA6NCL1 334 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MBD3L4A6NDZ8 208 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MBD3L3A6NE82 208 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MBD3L5A6NJ08 208 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 GJE1A6NN92 205 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 BBIP1A8MTZ0 92 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 NUDT7P0C024 238 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 NID1P14543 1247 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 PRKCAP17252 672 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 GPX2P18283 190 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 ELK4P28324 431 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 CEACAM8P31997 349 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 LSP1P33241 339 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 SLC6A8P48029 635 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 SEC24CP53992 1094 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 FOXF1Q12946 379 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 CYLC2Q14093 348 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 LARS2Q15031 903 aaKnown RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 QPRTQ15274 297 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MAPK11Q15759 364 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 SGCBQ16585 318 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 ZSWIM7Q19AV6 140 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms