RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 ZP4Q12836 540 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 DDX39BQ13838 428 aaKnown RBP8.17□□□□□ -1.1
CDK11A-217ENST00000487462 LTB4RQ15722 352 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 EFNB3Q15768 340 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 HIST2H2ACQ16777 129 aaPredicted RBP8.17□□□□□ -1.1
CDK11A-217ENST00000487462 HIST2H2AA3Q6FI13 130 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 MED27Q6P2C8 311 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 MARCH3Q86UD3 253 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 CTAGE4Q8IX94 777 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 HUS1BQ8NHY5 278 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 NANPQ8TBE9 248 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 CPNE4Q96A23 557 aaPredicted RBP8.17□□□□□ -1.1
CDK11A-217ENST00000487462 REXO5Q96IC2 774 aaKnown RBP8.17□□□□□ -1.1
CDK11A-217ENST00000487462 KLHL15Q96M94 604 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 RNF145Q96MT1 663 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 PSD2Q9BQI7 771 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 FRMD8P1Q9BZ68 369 aaPredicted RBP8.17□□□□□ -1.1
CDK11A-217ENST00000487462 TREM2Q9NZC2 230 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 NOTCH3Q9UM47 2321 aa8.17□□□□□ -1.1
CDK11A-217ENST00000487462 C7orf72A4D263 438 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 TIMM23O14925 209 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 KNG1P01042 644 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 OR4A8P0C604 315 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 SAGP10523 405 aaPredicted RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 ENPP1P22413 925 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 FEN1P39748 380 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 TERF1P54274 439 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 MANFP55145 182 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 GP2P55259 537 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 GPX6P59796 221 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 KRTAP10-3P60369 221 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 LMO4P61968 165 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 TGFBIQ15582 683 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 RBMS3Q6XE24 437 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 C17orf107Q6ZR85 190 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 FRA10AC1Q70Z53 315 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 ADAMTSL2Q86TH1 951 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 NKAPQ8N5F7 415 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 WDR31Q8NA23 367 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 MRAPQ8TCY5 172 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 NEU4Q8WWR8 484 aaPredicted RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 ZNF75CPQ92670 426 aaPredicted RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 UBE2E3Q969T4 207 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 TMIGD2Q96BF3 282 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 GBP4Q96PP9 640 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 MTERF1Q99551 399 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 KLHDC3Q9BQ90 382 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 CENPKQ9BS16 269 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 SDHAF3Q9NRP4 125 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 CA10Q9NS85 328 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 FAM120CQ9NX05 1096 aaKnown RBP8.16□□□□□ -1.1
CDK11A-217ENST00000487462 IFNKQ9P0W0 207 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 OPN4Q9UHM6 478 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 MCM8Q9UJA3 840 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 CES1P1Q9UKY3 287 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 DNAH1Q9P2D7 4330 aa8.16□□□□□ -1.1
CDK11A-217ENST00000487462 IGHV3-15A0A0B4J1V0 119 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 A0A0G2JMP0 313 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 A0A0X1KG70 313 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 MAGEB16A2A368 324 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 SLC22A31A6NKX4 558 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 C9JVG2 144 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 CLDN34H7C241 214 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 RGS14O43566 566 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 MFAP3LO75121 409 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 STK16O75716 305 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 ME2P23368 584 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 FPR2P25090 351 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 SFTPDP35247 375 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 PIK3CBP42338 1070 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 MAGEA6P43360 314 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 FOXG1P55316 489 aaPredicted RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 MRPS22P82650 360 aaKnown RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 IL1RL1Q01638 556 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 CSTF3Q12996 717 aaKnown RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 ZNF460Q14592 562 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 GABRA6Q16445 453 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 PLPPR5Q32ZL2 321 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 TCHHL1Q5QJ38 904 aaPredicted RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 PDSS1Q5T2R2 415 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 FAM180BQ6P0A1 224 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 APOOLQ6UXV4 268 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 SLC44A2Q8IWA5 706 aaPredicted RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 CNTN4Q8IWV2 1026 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 KIR3DL3Q8N743 410 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 OR4M2Q8NGB6 313 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 POC1BQ8TC44 478 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 SLC25A28Q96A46 364 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 ZNF48Q96MX3 618 aaPredicted RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 ZNF300Q96RE9 604 aaPredicted RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 CNOT10Q9H9A5 744 aaKnown RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 SLC52A3Q9NQ40 469 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 FBXO9Q9UK97 447 aaPredicted RBP8.15□□□□□ -1.1
CDK11A-217ENST00000487462 VWA7Q9Y334 891 aa8.15□□□□□ -1.1
CDK11A-217ENST00000487462 A0A087WZY1 265 aa8.14□□□□□ -1.11
CDK11A-217ENST00000487462 A0A1W2PRB8 838 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms