RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SMAD7O15105 426 aaKnown RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 TUBBP07437 444 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 CREB1P16220 341 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 PSMB1P20618 241 aaKnown RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 ADH6P28332 368 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 RPL3P39023 403 aaKnown RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 PTH2RP49190 550 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 P2RX1P51575 399 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 ATP12AP54707 1039 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 TP53BP2Q13625 1128 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 TSC22D1Q15714 1073 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 ZNF239Q16600 458 aaKnown RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 NDUFAF6Q330K2 333 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 LSM12Q3MHD2 195 aaKnown RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 TMEM176BQ3YBM2 270 aaPredicted RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 ATP6AP1LQ52LC2 224 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 DCST2Q5T1A1 773 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 ZNF704Q6ZNC4 412 aaPredicted RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 STK32CQ86UX6 486 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 TUSC5Q8IXB3 177 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 RIMKLAQ8IXN7 391 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 ATP6V1C2Q8NEY4 427 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 OR56A1Q8NGH5 318 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 RNF128Q8TEB7 428 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS16-208ENST00000487461 TMEM204Q9BSN7 226 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 OR10A4Q9H209 315 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 ANKZF1Q9H8Y5 726 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 L2HGDHQ9H9P8 463 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 FANCFQ9NPI8 374 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 FAF1Q9UNN5 650 aaPredicted RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 ACTL7BQ9Y614 415 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 RAI1Q7Z5J4 1906 aaPredicted RBP10.87□□□□□ -0.67
VPS16-208ENST00000487461 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 DYNC1I1O14576 645 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 GCM2O75603 506 aaPredicted RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 LYPLA1O75608 230 aaPredicted RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 PRKD3O94806 890 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 SOX30O94993 753 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 NUDT14O95848 222 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 NUDT17P0C025 328 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 PABPC4LP0CB38 370 aaKnown RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 PAX1P15863 534 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 PRKCAP17252 672 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 ENPP1P22413 925 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 ELK4P28324 431 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 NR1H2P55055 460 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 ZNF844Q08AG5 666 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 SPDYE7PQ495Y7 208 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 TMEM201Q5SNT2 666 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 ALKBH2Q6NS38 261 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 GABRG1Q8N1C3 465 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 RIBC1Q8N443 379 aaPredicted RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 NATD1Q8N6N6 113 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 FNDC5Q8NAU1 212 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 ZNF527Q8NB42 609 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 OR5AK3PQ8NH89 298 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 CPNE4Q96A23 557 aaPredicted RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 S100PBPQ96BU1 408 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 REXO5Q96IC2 774 aaKnown RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 OR7D2Q96RA2 312 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 SDF2Q99470 211 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 PRPF18Q99633 342 aaKnown RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 HDHD5Q9BXW7 423 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 COQ10BQ9H8M1 238 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 TIGARQ9NQ88 270 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 ZNF701Q9NV72 531 aaPredicted RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 ATAD3AQ9NVI7 634 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 LGALS13Q9UHV8 139 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 DTNAQ9Y4J8 743 aa10.86□□□□□ -0.67
VPS16-208ENST00000487461 GPC6Q9Y625 555 aaPredicted RBP10.86□□□□□ -0.67
VPS16-208ENST00000487461 NSD1Q96L73 2696 aaPredicted RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 GJE1A6NN92 205 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 H3BNH8 94 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 HS3ST1O14792 307 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 CFLARO15519 480 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 SKAP2O75563 359 aaPredicted RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 CNOT4O95628 575 aaKnown RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 BPGMP07738 259 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 YES1P07947 543 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 KRT16P08779 473 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 G6PDP11413 515 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 PRPS1L1P21108 318 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 SERPINB5P36952 375 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 SUMO3P55854 103 aaPredicted RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 HBA1P69905 142 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 RNPS1Q15287 305 aaKnown RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 SLC25A53Q5H9E4 307 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 TFAP2EQ6VUC0 442 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 FCRLAQ7L513 359 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 CLEC4FQ8N1N0 589 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 ZNF611Q8N823 705 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 ZNF614Q8N883 585 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 STEAP2Q8NFT2 490 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 OR5D16Q8NGK9 328 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 OR5W2Q8NH69 310 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 LILRB1Q8NHL6 650 aaPredicted RBP10.85□□□□□ -0.67
VPS16-208ENST00000487461 RFWD2Q8NHY2 731 aa10.85□□□□□ -0.67
VPS16-208ENST00000487461 RAB3IL1Q8TBN0 382 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms