RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 RBPMS2Q6ZRY4 209 aaKnown RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CLEC17AQ6ZS10 378 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CRLF3Q8IUI8 442 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 VRK3Q8IV63 474 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 MISPQ8IVT2 679 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CHERPQ8IWX8 916 aaKnown RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 KATNAL2Q8IYT4 538 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 LGI4Q8N135 537 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 AMER3Q8N944 861 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CAMKVQ8NCB2 501 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 OR7G3Q8NG95 312 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 OR2A1Q8NGT9 310 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 BBS10Q8TAM1 723 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 MCOLN3Q8TDD5 553 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 SKA2Q8WVK7 121 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 NRGNQ92686 78 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 BCL2L2Q92843 193 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TMEM125Q96AQ2 219 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TMCO6Q96DC7 493 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 RNFT2Q96EX2 444 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 FBXL20Q96IG2 436 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 RAX2Q96IS3 184 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF479Q96JC4 524 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 PDLIM2Q96JY6 352 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 WACQ9BTA9 647 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF416Q9BWM5 594 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CDADC1Q9BWV3 514 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 SGPP1Q9BX95 441 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 GON7Q9BXV9 100 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 POLDIP3Q9BY77 421 aaKnown RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 HES7Q9BYE0 225 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 UCK2Q9BZX2 261 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TRIM15Q9C019 465 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF350Q9GZX5 532 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TP63Q9H3D4 680 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TPK1Q9H3S4 243 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 MMP25Q9NPA2 562 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 PCDHB16Q9NRJ7 776 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF446Q9NWS9 450 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ANKRD10Q9NXR5 420 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 IFNKQ9P0W0 207 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 LPAR3Q9UBY5 353 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 DCDC2Q9UHG0 476 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ST6GALNAC2Q9UJ37 374 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 GNPTGQ9UJJ9 305 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 RNF24Q9Y225 148 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 RNF6Q9Y252 685 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 AP3M1Q9Y2T2 418 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 HYOU1Q9Y4L1 999 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 PUS1Q9Y606 427 aaKnown RBP eCLIP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ALG6Q9Y672 507 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 IGHV3-20A0A0C4DH32 117 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 A0A1B0GTH9 108 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 FAM237BA0A1B0GVD1 139 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 ELOVL7A1L3X0 281 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 MROH6A6NGR9 719 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 TRPC5OSA6NMA1 111 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 H0YIG0 161 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 KLRC4-KLRK1H3BQV0 150 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 STX16O14662 325 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 ZNHIT1O43257 154 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 FOXS1O43638 330 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 KLK8O60259 260 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 NME2P1O60361 137 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 OR1I1O60431 355 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 SLC25A12O75746 678 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 NEURL1O76050 574 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 C1orf105O95561 183 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 RAB3DO95716 219 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 ENO1P06733 434 aaKnown RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 LINGO3P0C6S8 592 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 ITGA2P17301 1181 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 DRD5P21918 477 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 CD40P25942 277 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 PSMB5P28074 263 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 FOXN2P32314 431 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 ECI1P42126 302 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 CYB561P49447 251 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 DGKQP52824 942 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 MTTPP55157 894 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 MAT1AQ00266 395 aaKnown RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 RELAQ04206 551 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 TFF3Q07654 80 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 TGM3Q08188 693 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 IFFO1Q0D2I5 559 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 SLAQ13239 276 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 SYT16Q17RD7 645 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 SLC36A3Q495N2 470 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 HIKESHIQ53FT3 197 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 SPANXN2Q5MJ10 180 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 LCN1P1Q5VSP4 162 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 SULT1C3Q6IMI6 304 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 HMBOX1Q6NT76 420 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 TTC27Q6P3X3 843 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 LINC00523Q86TU6 105 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 RPS19BP1Q86WX3 136 aaKnown RBP6.24□□□□□ -1.41
HDAC3-209ENST00000486618 CCDC36Q8IYA8 594 aa6.24□□□□□ -1.41
HDAC3-209ENST00000486618 PM20D2Q8IYS1 436 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms