RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 CALML5Q9NZT1 146 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 P2RX2Q9UBL9 471 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 MCTS1Q9ULC4 181 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 SLC35A3Q9Y2D2 325 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 GPC6Q9Y625 555 aaPredicted RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF407Q9C0G0 2248 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 NCKAP5O14513 1909 aa11.27□□□□□ -0.6
PTCD1-205ENST00000485746 EXPH5Q8NEV8 1989 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 C7orf72A4D263 438 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 GJE1A6NN92 205 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 TNFSF11O14788 317 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 KIAA0513O60268 411 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 TGM6O95932 706 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 PLGP00747 810 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 C1QCP02747 245 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ETFAP13804 333 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ADH6P28332 368 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 SSTR2P30874 369 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 MRPL19P49406 292 aaKnown RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ATP4BP51164 291 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 DSTNP60981 165 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 SIRPAP78324 504 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 TFF3Q07654 80 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 QPRTQ15274 297 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM44Q2T9K0 475 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 GTDC1Q4AE62 458 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 HBMQ6B0K9 141 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 FRRS1Q6ZNA5 592 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 LUZP2Q86TE4 346 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 PEX5LQ8IYB4 626 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 LILRA2Q8N149 483 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 RELL2Q8NC24 303 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 OR2V1Q8NHB1 315 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 OIT3Q8WWZ8 545 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM234Q8WY98 164 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 FIG4Q92562 907 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 GTF2H4Q92759 462 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 AURKBQ96GD4 344 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF845Q96IR2 970 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 SIKE1Q9BRV8 207 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ENKD1Q9H0I2 346 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 TIGARQ9NQ88 270 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 SERINC1Q9NRX5 453 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 THUMPD1Q9NXG2 353 aaKnown RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 L3MBTL1Q9Y468 752 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF175Q9Y473 711 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 PCDHB14Q9Y5E9 798 aa11.27□□□□□ -0.61
PTCD1-205ENST00000485746 A0A096LPI6 279 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 C5orf58C9J3I9 102 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 CLIC1O00299 241 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 SYT5O00445 386 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 CXCL13O43927 109 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 CHRM4P08173 479 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 GUSBP08236 651 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 LINGO3P0C6S8 592 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 FCGR2AP12318 317 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 IL7RP16871 459 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 SLC7A1P30825 629 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 RYKP34925 604 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 PEX19P40855 299 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 MAGEA8P43361 318 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 CRISP3P54108 245 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 CARD18P57730 90 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 KCNJ10P78508 379 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 FUT5Q11128 374 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 SF3A3Q12874 501 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 FOXF2Q12947 444 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 SNTB1Q13884 538 aaKnown RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 FGFBP1Q14512 234 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 TOMM34Q15785 309 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 MAPK14Q16539 360 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM176BQ3YBM2 270 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 POMZP3Q6PJE2 187 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 ESPNLQ6ZVH7 1005 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 ADGRE4PQ86SQ3 457 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 KIF18BQ86Y91 864 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 DMRTC2Q8IXT2 367 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 METTL25Q8N6Q8 603 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 OR10D3Q8NH80 312 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 FNDC9Q8TBE3 224 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 WDR60Q8WVS4 1066 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 OSTF1Q92882 214 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 RNASE6Q93091 150 aaKnown RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 MRGPRX4Q96LA9 322 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 KLHL15Q96M94 604 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 NPAS1Q99742 590 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 KLHDC3Q9BQ90 382 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF559Q9BR84 538 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 SAP130Q9H0E3 1048 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms