RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-207ENST00000485465 ADGRG5Q8IZF4 528 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 TOR1AIP2Q8NFQ8 470 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 OR2M3Q8NG83 312 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 OR4K17Q8NGC6 315 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 OR5W2Q8NH69 310 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 VANGL1Q8TAA9 524 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-207ENST00000485465 GNRHR2Q96P88 292 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 DHRS12A0PJE2 317 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 ANKUB1A6NFN9 424 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 GMFGO60234 142 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 ADAM11O75078 769 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 SEMG1P04279 462 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 GPIP06744 558 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 SFTPCP11686 197 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 PRG2P13727 222 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 ACAA2P42765 397 aaKnown RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 SLC6A8P48029 635 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 CCR4P51679 360 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 ZNF136P52737 540 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 SUMO3P55854 103 aaPredicted RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 HOXC5Q00444 222 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 KCNC4Q03721 635 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 EPS8Q12929 822 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 CBFBQ13951 182 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 NPTX1Q15818 432 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 PLEKHN1Q494U1 663 aaPredicted RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 RBM45Q8IUH3 476 aaKnown RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 ZFP62Q8NB50 900 aaPredicted RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 FAM98AQ8NCA5 519 aaKnown RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 OR6T1Q8NGN1 323 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 GPR119Q8TDV5 335 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 CANT1Q8WVQ1 401 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 ARSGQ96EG1 525 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 RSRC1Q96IZ7 334 aaKnown RBP16■□□□□ 0.15
CHMP3-207ENST00000485465 SEPHS2Q99611 448 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 KLHDC3Q9BQ90 382 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 MAGIXQ9H6Y5 334 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 ANAPC2Q9UJX6 822 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 FBXL2Q9UKC9 423 aa16■□□□□ 0.15
CHMP3-207ENST00000485465 AP3D1O14617 1153 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 CBR3O75828 277 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 IFNW1P05000 195 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 LINGO3P0C6S8 592 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 PSMA4P25789 261 aaKnown RBP15.99■□□□□ 0.15
CHMP3-207ENST00000485465 RYKP34925 604 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 CHRNB3Q05901 458 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 NADK2Q4G0N4 442 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 FAM98BQ52LJ0 330 aaKnown RBP15.99■□□□□ 0.15
CHMP3-207ENST00000485465 SLC6A19Q695T7 634 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 RPUSD3Q6P087 351 aaKnown RBP15.99■□□□□ 0.15
CHMP3-207ENST00000485465 RANBP3LQ86VV4 465 aaPredicted RBP15.99■□□□□ 0.15
CHMP3-207ENST00000485465 C7orf34Q96L11 122 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 TTTY12Q9BZ98 90 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 AMBRA1Q9C0C7 1298 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 SLC25A18Q9H1K4 315 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 PTGES2Q9H7Z7 377 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 LHX6Q9UPM6 363 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 C15orf41Q9Y2V0 281 aa15.99■□□□□ 0.15
CHMP3-207ENST00000485465 DSPP15924 2871 aaKnown RBP15.99■□□□□ 0.15
CHMP3-207ENST00000485465 FAAHO00519 579 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 TPST2O60704 377 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 FMO6PO60774 539 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 GLSO94925 669 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-207ENST00000485465 NUDT14O95848 222 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 RFPL3SP0C7P2 107 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 UQCRBP14927 111 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 PGCP20142 388 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 RFC3P40938 356 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 PLGLB1Q02325 96 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 HYAL4Q2M3T9 481 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 SLC39A7Q92504 469 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 PNPLA2Q96AD5 504 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 C1GALT1C1Q96EU7 318 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 WBP1Q96G27 269 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 DUS3LQ96G46 650 aaKnown RBP15.98■□□□□ 0.15
CHMP3-207ENST00000485465 MCHR1Q99705 422 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 ZNF559Q9BR84 538 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 PRR14Q9BWN1 585 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 IL1RAPQ9NPH3 570 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 CCM2LQ9NUG4 571 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-207ENST00000485465 TESQ9UGI8 421 aaKnown RBP15.98■□□□□ 0.15
CHMP3-207ENST00000485465 PRDM4Q9UKN5 801 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 AURKCQ9UQB9 309 aa15.98■□□□□ 0.15
CHMP3-207ENST00000485465 EML6Q6ZMW3 1958 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 CDC40O60508 579 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 RASAL1O95294 804 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 FABP3P05413 133 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 RAP2AP10114 183 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 HOXB6P17509 224 aaKnown RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 HTR2AP28223 471 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 IDH2P48735 452 aaKnown RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 DSCR4P56555 118 aaPredicted RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 PPIAP62937 165 aaKnown RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 VLDLRP98155 873 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 PMP22Q01453 160 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 QPRTQ15274 297 aa15.97■□□□□ 0.15
CHMP3-207ENST00000485465 TOMM34Q15785 309 aaPredicted RBP15.97■□□□□ 0.15
CHMP3-207ENST00000485465 PCSK4Q6UW60 755 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms