RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CACNA1DQ01668 2161 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 NAV2Q8IVL1 2488 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 NKX2-6A6NCS4 301 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 MBD3L4A6NDZ8 208 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 MBD3L3A6NE82 208 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 MBD3L5A6NJ08 208 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 ANGPT2O15123 496 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 HNRNPRO43390 633 aaKnown RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 LINGO3P0C6S8 592 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 UBTFL6P0CB48 400 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 PPIBP23284 216 aaKnown RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 SUCLG1P53597 346 aaKnown RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 MVDP53602 400 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 CLDN20P56880 219 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 RAC1P63000 192 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 KCNJ10P78508 379 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 CBFBQ13951 182 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 SGCBQ16585 318 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 SLC25A35Q3KQZ1 300 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 PAGE3Q5JUK9 113 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 HMGN2P46Q86SG4 172 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 LIX1LQ8IVB5 337 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 MBD3L2Q8NHZ7 208 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 ARSGQ96EG1 525 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 UCN2Q96RP3 112 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 THUMPD3Q9BV44 507 aaKnown RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 SLC38A1Q9H2H9 487 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 SLC52A3Q9NQ40 469 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 MRGBPQ9NV56 204 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 ZNF629Q9UEG4 869 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 NDUFAF1Q9Y375 327 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 GPC6Q9Y625 555 aaPredicted RBP16.58■□□□□ 0.24
SMIM4-204ENST00000482728 DOCK7Q96N67 2140 aa16.58■□□□□ 0.24
SMIM4-204ENST00000482728 HEATR5AQ86XA9 2040 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 CENPVL1A0A0U1RR11 272 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 H0YC42 278 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 CHRM4P08173 479 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 TFPTP0C1Z6 253 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 COX6B1P14854 86 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 IL7RP16871 459 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 BMP5P22003 454 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 CTSSP25774 331 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 ADH6P28332 368 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 TPD52P55327 224 aaPredicted RBP16.57■□□□□ 0.24
SMIM4-204ENST00000482728 FADDQ13158 208 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 FGFBP1Q14512 234 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 RGNQ15493 299 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 LRIF1Q5T3J3 769 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 ADGRE4PQ86SQ3 457 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 PEX5LQ8IYB4 626 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 C9orf106Q8NAJ2 232 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 NAXEQ8NCW5 288 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 FBXO27Q8NI29 283 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 SLC38A5Q8WUX1 472 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 ZFP3Q96NJ6 502 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 PINK1Q9BXM7 581 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 QRSL1Q9H0R6 528 aaKnown RBP16.57■□□□□ 0.24
SMIM4-204ENST00000482728 CACYBPQ9HB71 228 aaKnown RBP16.57■□□□□ 0.24
SMIM4-204ENST00000482728 SLAMF8Q9P0V8 285 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.57■□□□□ 0.24
SMIM4-204ENST00000482728 LEF1Q9UJU2 399 aaPredicted RBP16.57■□□□□ 0.24
SMIM4-204ENST00000482728 L3MBTL1Q9Y468 752 aa16.57■□□□□ 0.24
SMIM4-204ENST00000482728 AGAP5A6NIR3 686 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 SLC22A20A6NK97 555 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 EVPLLA8MZ36 301 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 C19orf84I3L1E1 186 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 EIF1AYO14602 144 aaKnown RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 RCBTB2O95199 551 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 OPN1LWP04000 364 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 BCHEP06276 602 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 DBIP07108 87 aaKnown RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 SNRPB2P08579 225 aaKnown RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 TMIGD3P0DMS9 266 aaPredicted RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 PGCP20142 388 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 PSMA4P25789 261 aaKnown RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 OPRM1P35372 400 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 CRISP3P54108 245 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 CLDN15P56746 228 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 SKP2Q13309 424 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 QPRTQ15274 297 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 TOMM34Q15785 309 aaPredicted RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 PDSS1Q5T2R2 415 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 CMIPQ8IY22 773 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 LILRA2Q8N149 483 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 POC1BQ8TC44 478 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 TSPEARQ8WU66 669 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 TMEM234Q8WY98 164 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 MARVELD3Q96A59 401 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 INTS12Q96CB8 462 aaKnown RBP16.56■□□□□ 0.24
SMIM4-204ENST00000482728 LRRC46Q96FV0 321 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 MRGPRX4Q96LA9 322 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 NPAS1Q99742 590 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 ZNF385DQ9H6B1 395 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 TMEM185BQ9H7F4 350 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 SLC25A37Q9NYZ2 338 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 CLCF1Q9UBD9 225 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 ZNF232Q9UNY5 417 aa16.56■□□□□ 0.24
SMIM4-204ENST00000482728 MED12LQ86YW9 2145 aa16.55■□□□□ 0.24
SMIM4-204ENST00000482728 C5orf58C9J3I9 102 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms