RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 KLRC3Q07444 240 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SLAMF1Q13291 335 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FASTKD3Q14CZ7 662 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 DUOXA1Q1HG43 343 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 Q4G0T1 1027 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TCEAL5Q5H9L2 206 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FGD3Q5JSP0 725 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FAM69BQ5VUD6 431 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SLC8B1Q6J4K2 584 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SASS6Q6UVJ0 657 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ZNF562Q6V9R5 426 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 Q6ZSV7 163 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 COX8CQ7Z4L0 72 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 LUZP2Q86TE4 346 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FNDC5Q8NAU1 212 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 OR5AU1Q8NGC0 362 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ANGPTL6Q8NI99 470 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ARNTL2Q8WYA1 636 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TMEM121Q9BTD3 319 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 EFHD1Q9BUP0 239 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ST6GALNAC5Q9BVH7 336 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GPR174Q9BXC1 333 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 POLE4Q9NR33 117 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 DCDC2Q9UHG0 476 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 POMT2Q9UKY4 750 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 NME7Q9Y5B8 376 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ATP6V1DQ9Y5K8 247 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GOLGA8QA0A0J9YX86 632 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 LOC390937A0A1W2PQ73 354 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 C2CD4DB7Z1M9 353 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ARPC2O15144 300 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 P2RX6O15547 441 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 CLN5O75503 358 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FTH1P02794 183 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MT-ND2P03891 347 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ANXA4P09525 319 aaPredicted RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 CT45A8P0DMV1 189 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 CT45A9P0DMV2 189 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 EIF2S2P20042 333 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 EPHA2P29317 976 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MNDAP41218 407 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 PLA2G16P53816 162 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 UBE2IP63279 158 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 ASPHQ12797 758 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MYBPHQ13203 477 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 AMZ1Q400G9 498 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SFT2D3Q587I9 215 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 CT45A2Q5DJT8 189 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PIK3CD-AS1Q5SR53 167 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SPECC1LQ69YQ0 1117 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 LINGO4Q6UY18 593 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TMEM64Q6YI46 380 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 NLRP9Q7RTR0 991 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 COMMD2Q86X83 199 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 LRRC34Q8IZ02 419 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FAM47BQ8NA70 645 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MDS2Q8NDY4 140 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 OR4D5Q8NGN0 318 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PAQR8Q8TEZ7 354 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PCED1BQ96HM7 432 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 C20orf173Q96LM9 149 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 KRTAP3-1Q9BYR8 98 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 CSTL1Q9H114 145 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MRPS30Q9NP92 439 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 FGF21Q9NSA1 209 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 VPS13CQ709C8 3753 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ZFHX3Q15911 3703 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 ZNF532Q9HCE3 1301 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TRBV5-3A0A0A0MS03 114 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 E9PMD0 336 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SMLR1H3BR10 107 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SGK494L7N484 410 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TRDMT1O14717 391 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 FPGTO14772 594 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PEX1O43933 1283 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 RPS6KA5O75582 802 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SERPINI2O75830 405 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TOXO94900 526 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PGK1P00558 417 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 TCN1P20061 433 aaPredicted RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 RPL9P32969 192 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 SGSHP51688 502 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GSCP56915 257 aaPredicted RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 RPS4XP62701 263 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 MADCAM1Q13477 382 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 SSX2Q16385 188 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GPR157Q5UAW9 335 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 OR52W1Q6IF63 320 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 METTL7BQ6UX53 244 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 C3P1Q6ZMU1 363 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.92□□□□□ -1.94
SMC6-208ENST00000481708 OR6M1Q8NGM8 313 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 C18orf25Q96B23 403 aaPredicted RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 SGK494Q96LW2 274 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 FMO2Q99518 471 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 PRRG4Q9BZD6 226 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 RAB1BQ9H0U4 201 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 EBF3Q9H4W6 596 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 WDR55Q9H6Y2 383 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms