RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PCSK1NQ9UHG2 260 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 ADAM28Q9UKQ2 775 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 PIGLQ9Y2B2 252 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 EXOSC1Q9Y3B2 195 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 CSNK1G3Q9Y6M4 447 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 A0A087WW49 117 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 A0A1B0GUV1 79 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 PCP4L1A6NKN8 68 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 FBP2O00757 339 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 TIMM8AO60220 97 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 STX11O75558 287 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 CCDC159P0C7I6 412 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 PABPC4LP0CB38 370 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 PRSS56P0CW18 603 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 ANXA8P13928 327 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 CD1DP15813 335 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 EIF2S2P20042 333 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 MX1P20591 662 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 FCGR2CP31995 323 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 RPL9P32969 192 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 POU3F4P49335 361 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 CRYBA2P53672 197 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 TMEM187Q14656 261 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 CD226Q15762 336 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 ANXA8L1Q5VT79 327 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 FAM71F2Q6NXP2 309 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 KDM7AQ6ZMT4 941 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 SERINC5Q86VE9 423 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 LSMEM2Q8N112 164 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 CLEC4FQ8N1N0 589 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 RFLNBQ8N5W9 214 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 STXBP6Q8NFX7 210 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 OR1F12Q8NHA8 337 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 CNIH3Q8TBE1 160 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 PCNPQ8WW12 178 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF75CPQ92670 426 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 RAB3CQ96E17 227 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 AGAP3Q96P47 875 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 USP28Q96RU2 1077 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 FAM192AQ9GZU8 254 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 IKZF5Q9H5V7 419 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 WDR41Q9HAD4 459 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF334Q9HCZ1 680 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 ABCC12Q96J65 1359 aa6.18□□□□□ -1.42
GAPVD1-217ENST00000479511 NPIPA5A0A0B4J1W7 369 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 BTBD17A6NE02 478 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 NPIPA5E9PKD4 350 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 OR7A17O14581 309 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 TM9SF1O15321 606 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 PCDH7O60245 1069 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 PDE5AO76074 875 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 CLDN1O95832 211 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 PRSS1P07477 247 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 SP1P08047 785 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 MRPS21P82921 87 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 TGM3Q08188 693 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 CAVIN4Q5BKX8 364 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 PDZK1Q5T2W1 519 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF324BQ6AW86 544 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 OR4F3Q6IEY1 312 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 MOB2Q70IA6 237 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 NLRP9Q7RTR0 991 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 APLFQ8IW19 511 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 PHC2Q8IXK0 858 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 CLDN19Q8N6F1 224 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 SCFD1Q8WVM8 642 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 C12orf66Q96MD2 445 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 RCHY1Q96PM5 261 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 CHRDL1Q9BU40 450 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 NUP58Q9BVL2 599 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 RBM4Q9BWF3 364 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 POLR3FQ9H1D9 316 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 ADGRL4Q9HBW9 690 aa6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 EIF3LQ9Y262 564 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF646O15015 1829 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 A0A1B0GVL5 298 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 NCF1BA6NI72 391 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 NCF1CA8MVU1 366 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 H0YIV9 168 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 K7EQD1 137 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF749O43361 778 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 PPIHO43447 177 aaKnown RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 TPST2O60704 377 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 CTAG2O75638 210 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 NXPH4O95158 308 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 F10P00742 488 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 UBTFL1P0CB47 393 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 MMP11P24347 488 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 NF2P35240 595 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 TSFMP43897 325 aaKnown RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 THBS3P49746 956 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 CSTF1Q05048 431 aaKnown RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 C1orf61Q13536 156 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 GANABQ14697 944 aaKnown RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 SSX2Q16385 188 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 ECSCRQ19T08 205 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 SLX4IPQ5VYV7 408 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 ACSM5Q6NUN0 579 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 Q6ZSR9 355 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 CCDC80Q76M96 950 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms