RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FAM53CQ9NYF3 392 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ICAM5Q9UMF0 924 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF337Q9Y3M9 751 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 FAM215AQ9Y5M1 114 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 DSPPQ9NZW4 1301 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 EXPH5Q8NEV8 1989 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 ESPL1Q14674 2120 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 C5orf58C9J3I9 102 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 FAM47E-STBD1D6RA91 191 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 H0YC42 278 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 SLC22A2O15244 555 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 EIF4E2O60573 245 aaKnown RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 WDR1O75083 606 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 OPN1LWP04000 364 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 ARAFP10398 606 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 BMP2P12643 396 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 IL7RP16871 459 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 GPX2P18283 190 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 IL11P20809 199 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 RPS4Y1P22090 263 aaKnown RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 CHMP24386 653 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 AQP1P29972 269 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 ADSLP30566 484 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 RYKP34925 604 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 PGM1P36871 562 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 TPD52P55327 224 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 SUMO3P55854 103 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 NUP107P57740 925 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 KCNJ10P78508 379 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 CDK6Q00534 326 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 PMPCAQ10713 525 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 CYP51A1Q16850 503 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 ACSF3Q4G176 576 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 RABL3Q5HYI8 236 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 RPTNQ6XPR3 784 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 B3GNT6Q6ZMB0 384 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 PEX5LQ8IYB4 626 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 PM20D2Q8IYS1 436 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 EID3Q8N140 333 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 TOR1AIP2Q8NFQ8 470 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 OR52P1PQ8NH57 321 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 OR5W2Q8NH69 310 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 POC1BQ8TC44 478 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 WDR60Q8WVS4 1066 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 CNOT9Q92600 299 aaKnown RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 LRRC58Q96CX6 371 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 TRIB1Q96RU8 372 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 LAT2Q9GZY6 243 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 PIF1Q9H611 641 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 MTHFD2LQ9H903 347 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 HHATLQ9HCP6 504 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 RLIMQ9NVW2 624 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 CALML5Q9NZT1 146 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 CORO2BQ9UQ03 480 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 SLC35A3Q9Y2D2 325 aa9.28□□□□□ -0.92
HDAC6-222ENST00000478095 MRPS18CQ9Y3D5 142 aaKnown RBP9.28□□□□□ -0.92
HDAC6-222ENST00000478095 A0A087WZY1 265 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 A0A0G2JPF8 293 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 WIPF3A6NGB9 483 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 HNRNPCL2B2RXH8 293 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 HNRNPCL3B7ZW38 293 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 AP3D1O14617 1153 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 AIM2O14862 343 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 HNRNPCL1O60812 293 aaKnown RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ADAM11O75078 769 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 PGM3O95394 542 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 DBIP07108 87 aaKnown RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 LINGO3P0C6S8 592 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 HNRNPCL4P0DMR1 293 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 GLI4P10075 376 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 PEPDP12955 493 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 COX4I1P13073 169 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 NID1P14543 1247 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 GABRA1P14867 456 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CPN1P15169 458 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF708P17019 499 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF17P17021 662 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CLDN18P56856 261 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CLDN20P56880 219 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CBFBQ13951 182 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 SCARB2Q14108 478 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 GNA13Q14344 377 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 QPRTQ15274 297 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CDSNQ15517 529 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ADRM1Q16186 407 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 TMEM44Q2T9K0 475 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 LIN52Q52LA3 116 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 COQ5Q5HYK3 327 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 MRPL2Q5T653 305 aaKnown RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 AP1ARQ63HQ0 302 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 NANOGP8Q6NSW7 305 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 MTFR2Q6P444 385 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 POMZP3Q6PJE2 187 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF836Q6ZNA1 936 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 SEM1Q6ZVN7 128 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 PIGWQ7Z7B1 504 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 MRGPRGQ86SM5 289 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 PTOV1Q86YD1 416 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CCDC71Q8IV32 467 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms