RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TTKP33981 857 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 EIF1P41567 113 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 MAGEA12P43365 314 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 SERPINB4P48594 390 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 MANFP55145 182 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 POU6F2P78424 691 aaPredicted RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 VLDLRP98155 873 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF117Q03924 483 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 LOXL1Q08397 574 aaPredicted RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 RASGEF1BQ0VAM2 473 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 LCP2Q13094 533 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 CD226Q15762 336 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 NDUFAF6Q330K2 333 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM71E1Q6IPT2 247 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM166AQ6J272 317 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 KLHL17Q6TDP4 642 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 TMEM108Q6UXF1 575 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 DNM1P46Q6ZS02 220 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 Q6ZT83 130 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ZAR1Q86SH2 424 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 DTX2Q86UW9 622 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 TDRPQ86YL5 185 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 MISPQ8IVT2 679 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 CDRT4Q8N9R6 151 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF527Q8NB42 609 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 SLC16A11Q8NCK7 471 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 OR6Y1Q8NGX8 325 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 CEP70Q8NHQ1 597 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ACTRT2Q8TDY3 377 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ZFP90Q8TF47 636 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 DNAJA3Q96EY1 480 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 MS4A4EQ96PG1 132 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 OR5B2Q96R09 309 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF300Q96RE9 604 aaPredicted RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 USB1Q9BQ65 265 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 KLHDC3Q9BQ90 382 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 C1QTNF6Q9BXI9 259 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 IQCGQ9H095 443 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 CDC42EP4Q9H3Q1 356 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 L2HGDHQ9H9P8 463 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 MYNNQ9NPC7 610 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 UBQLN4Q9NRR5 601 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 NPAP1Q9NZP6 1156 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 SH3BP4Q9P0V3 963 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 KLHL9Q9P2J3 617 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 CARD8Q9Y2G2 431 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 FIS1Q9Y3D6 152 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 LOC100289279A0A1B0GTE1 492 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 EXOC1LA0A1B0GW35 172 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 C7orf72A4D263 438 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF814B7Z6K7 855 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 E7EQL1 145 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 H3BNH8 94 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 GOLGA8RI6L899 631 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 CYP7B1O75881 506 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 NKX2-2O95096 273 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 PSMG1O95456 288 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 SBK3P0C264 359 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 LINGO3P0C6S8 592 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 DHRS4L1P0CG22 281 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 BMP4P12644 408 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 APEHP13798 732 aaKnown RBP5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 IMPDH1P20839 514 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 USF1P22415 310 aaPredicted RBP5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 IGHV1-2P23083 117 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 ATP5F1P24539 256 aaPredicted RBP5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 IGFBP5P24593 272 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 ELK4P28324 431 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 CASQ1P31415 396 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 OR3A2P47893 321 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 FOXA1P55317 472 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 PKNOX1P55347 436 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 LSM11P83369 360 aaKnown RBP eCLIP5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 CHRNB3Q05901 458 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 SELENBP1Q13228 472 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 MLC1Q15049 377 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 DUSP5Q16690 384 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 SPDYE7PQ495Y7 208 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 IQCCQ4KMZ1 466 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 TIMM23BQ5SRD1 257 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM120AOSQ5T036 256 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 C9orf135Q5VTT2 229 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 LIPNQ5VXI9 398 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 NOXRED1Q6NXP6 359 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 CDC73Q6P1J9 531 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 GALNT18Q6P9A2 607 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 LRIG3Q6UXM1 1119 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 Q6ZSR9 355 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 IKBIPQ70UQ0 350 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 SLC22A9Q8IVM8 553 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 SLC43A2Q8N370 569 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 OR10H5Q8NGA6 315 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 CLHC1Q8NHS4 586 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 IFT81Q8WYA0 676 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 CDS1Q92903 461 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 PPCDCQ96CD2 204 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 C16orf58Q96GQ5 468 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 EGLN2Q96KS0 407 aa5.9□□□□□ -1.46
RTFDC1-206ENST00000477485 DHRS9Q9BPW9 319 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms