RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MRM3Q9HC36 420 aaKnown RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 DNAJC4Q9NNZ3 241 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 PPANQ9NQ55 473 aaKnown RBP3.37□□□□□ -1.87
UBR3-209ENST00000477461 NUDT4Q9NZJ9 180 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 APPL1Q9UKG1 709 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 RNF150Q9ULK6 438 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 WDR37Q9Y2I8 494 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 PPIL1Q9Y3C6 166 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 ANGPTL3Q9Y5C1 460 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 LIPGQ9Y5X9 500 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 NUMA1Q14980 2115 aa3.37□□□□□ -1.87
UBR3-209ENST00000477461 PRRC2AP48634 2157 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 CEP192Q8TEP8 1941 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 THADAQ6YHU6 1953 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 LRRK1Q38SD2 2015 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 TRANK1O15050 2925 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 A0A087WUV0 522 aaPredicted RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 GLYATL1P3A0A0U1RQE8 302 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 RGSL1A5PLK6 1076 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 MEI4A8MW99 385 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 E7ESA3 106 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 PSMD11O00231 422 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 BANF1O75531 89 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ATP6AP2O75787 350 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ACSL3O95573 720 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 SEMA4FO95754 770 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 IVLP07476 585 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 QDPRP09417 244 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 MAT2AP31153 395 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 DRD3P35462 400 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 HMGCLP35914 325 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 NUDT1P36639 197 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 SPAM1P38567 509 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 MMP12P39900 470 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 MAGEA3P43357 314 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 STC1P52823 247 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 METAP1P53582 386 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 RPS21P63220 83 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 CRADDP78560 199 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 SEMG2Q02383 582 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 CSTF1Q05048 431 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 IFFO1Q0D2I5 559 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 PEX6Q13608 980 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ZNF273Q14593 569 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 IHHQ14623 411 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 FAM174BQ3ZCQ3 159 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 GLIPR1L2Q4G1C9 344 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 TMEM52BQ4KMG9 183 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ANKRD20A4Q4UJ75 823 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ZRANB3Q5FWF4 1079 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 KRBOX4Q5JUW0 171 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 PIP5KL1Q5T9C9 394 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 PDPK2PQ6A1A2 396 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 OR4A47Q6IF82 309 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 NEK5Q6P3R8 708 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 AFTPHQ6ULP2 937 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 CES3Q6UWW8 571 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 C3orf62Q6ZUJ4 267 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 TRMT10CQ7L0Y3 403 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 TAS2R42Q7RTR8 314 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 KCNMB4Q86W47 210 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 HORMAD1Q86X24 394 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 LACC1Q8IV20 430 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 CTAGE3PQ8IX95 158 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 OR4K2Q8NGD2 314 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 OR13C4Q8NGS5 318 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 OR2T34Q8NGX1 318 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 OR1L3Q8NH93 324 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 GDAP1Q8TB36 358 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 AENQ8WTP8 325 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 PEX13Q92968 403 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 VPS33AQ96AX1 596 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ULK4Q96C45 1275 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 AP2M1Q96CW1 435 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 NUS1Q96E22 293 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 OTUB1Q96FW1 271 aaPredicted RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 DNAJC1Q96KC8 554 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 NSMCE3Q96MG7 304 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 MCCC1Q96RQ3 725 aaPredicted RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 LYSMD1Q96S90 227 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 RUFY1Q96T51 708 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 MAP3K3Q99759 626 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 KIFC1Q9BW19 673 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 SPATA16Q9BXB7 569 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 GPR174Q9BXC1 333 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 CDC42EP4Q9H3Q1 356 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 CHRAC1Q9NRG0 131 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 C20orf96Q9NUD7 363 aaPredicted RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 NLE1Q9NVX2 485 aaPredicted RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 TXNDC16Q9P2K2 825 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 CRLS1Q9UJA2 301 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ITM2BQ9Y287 266 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 TMED3Q9Y3Q3 217 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 FADS3Q9Y5Q0 445 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 ARL5AQ9Y689 179 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.36□□□□□ -1.87
UBR3-209ENST00000477461 TEX264Q9Y6I9 313 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 IKBKGQ9Y6K9 419 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 PLXND1Q9Y4D7 1925 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms