RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 LRFN4Q6PJG9 635 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 GDF7Q7Z4P5 450 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 OR5W2Q8NH69 310 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 NRSN2Q9GZP1 204 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 C6orf106Q9H6K1 298 aaPredicted RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 MOV10Q9HCE1 1003 aaKnown RBP10.28□□□□□ -0.76
COL27A1-204ENST00000477421 ITGB1BP2Q9UKP3 347 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 KLK4Q9Y5K2 254 aa10.28□□□□□ -0.76
COL27A1-204ENST00000477421 PRAMEF26H0Y7S4 382 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 LGI1O95970 557 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 GP1BBP13224 206 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 PRKCAP17252 672 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 ARFIP1P53367 373 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 CD300CQ08708 224 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 PLCXD2Q0VAA5 305 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 LYSMD2Q8IV50 215 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 OR8H3Q8N146 312 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 GPR32P1Q8NGA4 272 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 KIR3DX1Q9H7L2 352 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 HHATLQ9HCP6 504 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 C14orf105Q9NVL8 296 aa10.27□□□□□ -0.76
COL27A1-204ENST00000477421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 ZAR1LA6NP61 321 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 H7C1C5 153 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 FGF17O60258 216 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 AHSA1O95433 338 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 SCG5P05408 212 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 NRG3P56975 720 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 LCN6P62502 163 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 KLHL24Q6TFL4 600 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 GALNTL5Q7Z4T8 443 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 TMED4Q7Z7H5 227 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM151BQ8IW70 566 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 PHC2Q8IXK0 858 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 PFN4Q8NHR9 129 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 MROQ9BYG7 248 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 CHST8Q9H2A9 424 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 UBQLN3Q9H347 655 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM185BQ9H7F4 350 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 AKAP7Q9P0M2 348 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-204ENST00000477421 PRODH2Q9UF12 536 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 CASP8AP2Q9UKL3 1982 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 LRRN3E7EW58 273 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 NDUFB2O95178 105 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 RAB3BP20337 219 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 MAOAP21397 527 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 ARRB1P49407 418 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-204ENST00000477421 CSNK1EP49674 416 aaKnown RBP10.27□□□□□ -0.77
COL27A1-204ENST00000477421 SNTB2Q13425 540 aaKnown RBP10.27□□□□□ -0.77
COL27A1-204ENST00000477421 ELOAQ14241 798 aaKnown RBP10.27□□□□□ -0.77
COL27A1-204ENST00000477421 NTRK2Q16620 822 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 ACSM3Q53FZ2 586 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 BCL2L15Q5TBC7 163 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 SLC25A25Q6KCM7 469 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 GDPGP1Q6ZNW5 385 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 GPALPP1Q8IXQ4 340 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 BBS1Q8NFJ9 593 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 BEST4Q8NFU0 473 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 THAP4Q8WY91 577 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 C1QTNF2Q9BXJ5 285 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 CACNG6Q9BXT2 260 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 GABARAPL3Q9BY60 117 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 PITHD1Q9GZP4 211 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-204ENST00000477421 DPAGT1Q9H3H5 408 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 LRRN3Q9H3W5 708 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 FN3KQ9H479 309 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 SLC6A20Q9NP91 592 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 BABAM2Q9NXR7 383 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 TAS2R10Q9NYW0 307 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 GMEB2Q9UKD1 530 aa10.27□□□□□ -0.77
COL27A1-204ENST00000477421 PRSS47A8MTI9 375 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 GABRPO00591 440 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 RGS9O75916 674 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 PAHP00439 452 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 C4BPBP20851 252 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 SHC1P29353 583 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 PDE7AQ13946 482 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 GBX1Q14549 363 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 KCNJ8Q15842 424 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 DUSP6Q16828 381 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 OTPQ5XKR4 325 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 LIN54Q6MZP7 749 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 SLC16A12Q6ZSM3 486 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 LSRQ86X29 649 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 IL17RCQ8NAC3 791 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 TRMT10AQ8TBZ6 339 aaKnown RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ZDHHC12Q96GR4 267 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 MRGPRX1Q96LB2 322 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 CNN2Q99439 309 aaKnown RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 PLA2G12AQ9BZM1 189 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 DAPP1Q9UN19 280 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 GRIP1Q9Y3R0 1128 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 PCYT1BQ9Y5K3 369 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 NPC1O15118 1278 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 GPR143P51810 404 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 HCCSP53701 268 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 CTBP2P56545 445 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 CLDN12P56749 244 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms