RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 PAIP1Q9H074 479 aaKnown RBP12.11□□□□□ -0.47
ACTN4-205ENST00000477174 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
ACTN4-205ENST00000477174 CCDC134Q9H6E4 229 aa12.11□□□□□ -0.47
ACTN4-205ENST00000477174 MRGBPQ9NV56 204 aa12.11□□□□□ -0.47
ACTN4-205ENST00000477174 PAQR5Q9NXK6 330 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-205ENST00000477174 CLCF1Q9UBD9 225 aa12.11□□□□□ -0.47
ACTN4-205ENST00000477174 SLC35A3Q9Y2D2 325 aa12.11□□□□□ -0.47
ACTN4-205ENST00000477174 PKDREJQ9NTG1 2253 aa12.11□□□□□ -0.47
ACTN4-205ENST00000477174 A0A1W2PP18 115 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 AGAP5A6NIR3 686 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CLIC1O00299 241 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 OIP5O43482 229 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CRHP06850 196 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 TFPTP0C1Z6 253 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 TMIGD3P0DMS9 266 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 TROVE2P10155 538 aaKnown RBP eCLIP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 IGFBP2P18065 325 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 BMP5P22003 454 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 ELK4P28324 431 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 PGM1P36871 562 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 ZNF136P52737 540 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CLDN20P56880 219 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 KCNJ10P78508 379 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 SKP2Q13309 424 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CBFBQ13951 182 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 GNA13Q14344 377 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 FGFBP1Q14512 234 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 MAPK14Q16539 360 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 SYPL1Q16563 259 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 LRIF1Q5T3J3 769 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 DNAJC14Q6Y2X3 702 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 OLIG3Q7RTU3 272 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 GRAMD2AQ8IUY3 354 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CMIPQ8IY22 773 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 METTL25Q8N6Q8 603 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 ANKFN1Q8N957 763 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 PNPT1Q8TCS8 783 aaKnown RBP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 TSPEARQ8WU66 669 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 LRRC46Q96FV0 321 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 MRGPRX4Q96LA9 322 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 RNF145Q96MT1 663 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 TREX2Q9BQ50 279 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 KLHDC3Q9BQ90 382 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 SLC38A1Q9H2H9 487 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CALML5Q9NZT1 146 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 P2RX2Q9UBL9 471 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 L3MBTL1Q9Y468 752 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 ZNF175Q9Y473 711 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 GMEB1Q9Y692 573 aa12.1□□□□□ -0.47
ACTN4-205ENST00000477174 CACNA1CQ13936 2221 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 CENPVL1A0A0U1RR11 272 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 TMEM247A6NEH6 219 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 H0YC42 278 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 NR5A2O00482 541 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 TGM6O95932 706 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 CHRM4P08173 479 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 VIMP08670 466 aaKnown RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 PRKCAP17252 672 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 HOXB9P17482 250 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 PPIBP23284 216 aaKnown RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 RNF144AP50876 292 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 TPD52P55327 224 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 GUCY1A3Q02108 690 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 FADDQ13158 208 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 RGNQ15493 299 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 SGCBQ16585 318 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 NDUFAF6Q330K2 333 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 SLC25A53Q5H9E4 307 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 ESPNLQ6ZVH7 1005 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 GGNQ86UU5 652 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 LILRA2Q8N149 483 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 FAM71CQ8NEG0 241 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 FBXO27Q8NI29 283 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 AURKBQ96GD4 344 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 NPAS1Q99742 590 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 THUMPD3Q9BV44 507 aaKnown RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 SFXN3Q9BWM7 321 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 PINK1Q9BXM7 581 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 ZNF385DQ9H6B1 395 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 EXOSC3Q9NQT5 275 aaKnown RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 NPDC1Q9NQX5 325 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 FGFR1OP2Q9NVK5 253 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-205ENST00000477174 PRDM4Q9UKN5 801 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 PCNX3Q9H6A9 2034 aa12.09□□□□□ -0.47
ACTN4-205ENST00000477174 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.08□□□□□ -0.48
ACTN4-205ENST00000477174 A0A0G2JPF8 293 aa12.08□□□□□ -0.48
ACTN4-205ENST00000477174 GJE1A6NN92 205 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms