RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 DEFB133Q30KQ1 61 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 C14orf28Q4W4Y0 310 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 NIPAL3Q6P499 406 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 QSOX2Q6ZRP7 698 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 MED25Q71SY5 747 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SIRT6Q8N6T7 355 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 OR13C2Q8NGS9 318 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 C16orf52Q8NHV5 167 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SNRNP27Q8WVK2 155 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 KISS1RQ969F8 398 aaPredicted RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 DGAT2Q96PD7 388 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 CAPN10Q9HC96 672 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 EXOSC4Q9NPD3 245 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 SSR3Q9UNL2 185 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 DOLKQ9UPQ8 538 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 MED31Q9Y3C7 131 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 ISPDA4D126 451 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 PLD2O14939 933 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 MSL3P1P0C860 447 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 RBM34P42696 430 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 RPS25P62851 125 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 TCTE1Q5JU00 501 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 CXXC5Q7LFL8 322 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 CPOQ8IVL8 374 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 OR9Q1Q8NGQ5 310 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 OR51Q1Q8NH59 317 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 PTCHD1Q96NR3 888 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SDHCQ99643 169 aaPredicted RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 SPRTNQ9H040 489 aaPredicted RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 TMEM27Q9HBJ8 222 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 SMURF1Q9HCE7 757 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 UCKL1Q9NWZ5 548 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 ERVK13-1Q9NX77 482 aa10.61□□□□□ -0.71
NUP188-205ENST00000477069 YARS2Q9Y2Z4 477 aaKnown RBP10.61□□□□□ -0.71
NUP188-205ENST00000477069 CLDN4O14493 209 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 CTDSP2O14595 271 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 LRRTM2O43300 516 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 RPL6Q02878 288 aaKnown RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 DSG2Q14126 1118 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 ZNF267Q14586 743 aaPredicted RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 ZNF362Q5T0B9 420 aaPredicted RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 STEAP3Q658P3 488 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 VASNQ6EMK4 673 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 SMARCD3Q6STE5 483 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 LAPTM4BQ86VI4 370 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 GID4Q8IVV7 300 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 FAM83FQ8NEG4 500 aaPredicted RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 OR52N1Q8NH53 320 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 GRHL3Q8TE85 626 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 MMABQ96EY8 250 aaPredicted RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 TIMP4Q99727 224 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 KCNS3Q9BQ31 491 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 MED18Q9BUE0 208 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 HCAR1Q9BXC0 346 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 NUAK2Q9H093 628 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 OR10A5Q9H207 317 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 PDE7BQ9NP56 450 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 LANCL2Q9NS86 450 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 CHCHD3Q9NX63 227 aaKnown RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 ERVK-19Q9WJR5 959 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 MRPS17Q9Y2R5 130 aaKnown RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 FAM183AA6NL82 134 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 RCBTB2O95199 551 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 IL1AP01583 271 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 TSPAN19P0C672 248 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 CD1CP29017 333 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 GABRA5P31644 462 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 RFX3P48380 749 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 HNRNPKP61978 463 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP188-205ENST00000477069 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP188-205ENST00000477069 ZSWIM7Q19AV6 140 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 NKAIN2Q5VXU1 208 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 LHFPL3Q86UP9 236 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 CMIPQ8IY22 773 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 METTL27Q8N6F8 245 aaPredicted RBP10.6□□□□□ -0.71
NUP188-205ENST00000477069 BCORP1Q8N888 145 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 PSD4Q8NDX1 1056 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 OR52L1Q8NGH7 329 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 UFD1Q92890 307 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 SLC25A46Q96AG3 418 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 HSPA12BQ96MM6 686 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 NEURL2Q9BR09 285 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 TRIM2Q9C040 744 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 CMC2Q9NRP2 79 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 KLHL3Q9UH77 587 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 RNF215Q9Y6U7 377 aa10.6□□□□□ -0.71
NUP188-205ENST00000477069 IQCMA0A1B0GVH7 501 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SLC35F4A4IF30 521 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 CCDC182A6NF36 153 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SNX4O95219 450 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SLC2A5P22732 501 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 FGF9P31371 208 aaPredicted RBP10.59□□□□□ -0.71
NUP188-205ENST00000477069 RORCP51449 518 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 ATP12AP54707 1039 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 FOXK2Q01167 660 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 CDC20Q12834 499 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 DNASE1L3Q13609 305 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms