RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 FAM110BQ8TC76 370 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 MRPL57Q9BQC6 102 aaKnown RBP10.01□□□□□ -0.81
BRCA1-213ENST00000476777 ADAM19Q9H013 955 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 EQTNQ9NQ60 294 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 SIRT5Q9NXA8 310 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 KLHL9Q9P2J3 617 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 NUP214P35658 2090 aaPredicted RBP10□□□□□ -0.81
BRCA1-213ENST00000476777 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 A8MT66 165 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 C9JVG2 144 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 TGFAP01135 160 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 IFI6P09912 130 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 APEHP13798 732 aaKnown RBP10□□□□□ -0.81
BRCA1-213ENST00000476777 ITGA2P17301 1181 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 PTAFRP25105 342 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 NTSP30990 170 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 NR4A2P43354 598 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF83P51522 516 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 BTKQ06187 659 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF763Q0D2J5 394 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 RASA2Q15283 850 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 CR1LQ2VPA4 569 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 ARL13AQ5H913 290 aaPredicted RBP10□□□□□ -0.81
BRCA1-213ENST00000476777 FAM71E1Q6IPT2 247 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 MISPQ8IVT2 679 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 MMGT1Q8N4V1 131 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10□□□□□ -0.81
BRCA1-213ENST00000476777 CDC26Q8NHZ8 85 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 FBXO27Q8NI29 283 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 METTL6Q8TCB7 284 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 FBXO25Q8TCJ0 367 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 ZFP90Q8TF47 636 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF75CPQ92670 426 aaPredicted RBP10□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF382Q96SR6 550 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 INPP5KQ9BT40 448 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 MIEF1Q9NQG6 463 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 UBQLN4Q9NRR5 601 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 SLC25A15Q9Y619 301 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 SAR1BQ9Y6B6 198 aa10□□□□□ -0.81
BRCA1-213ENST00000476777 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 A0A1W2PQD3 144 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ESYT3A0FGR9 886 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF724A8MTY0 619 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 NDUFS8O00217 210 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ZSCAN12O43309 604 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 RAD51CO43502 376 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 RAD51DO75771 328 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 KCNK2O95069 426 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 PRPS2P11908 318 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 BMP4P12644 408 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 HPGDP15428 266 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 PAFAH1B1P43034 410 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 PDLIM4P50479 330 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 RAC3P60763 192 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF117Q03924 483 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 CHRNB3Q05901 458 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 RASGEF1BQ0VAM2 473 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 TSNAXIP1Q2TAA8 658 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 VPS26BQ4G0F5 336 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 UNC50Q53HI1 259 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 KLHL17Q6TDP4 642 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 GPRIN3Q6ZVF9 776 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF551Q7Z340 670 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-213ENST00000476777 DEPDC4Q8N2C3 294 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 CDRT4Q8N9R6 151 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ATP6V1C2Q8NEY4 427 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 OR6Y1Q8NGX8 325 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 OR52N5Q8NH56 324 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 C3orf49Q96BT1 292 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF524Q96C55 264 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 GIMAP5Q96F15 307 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 FOXN4Q96NZ1 517 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF300Q96RE9 604 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-213ENST00000476777 PIMREGQ9BSJ6 248 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 SOX7Q9BT81 388 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 MRPL46Q9H2W6 279 aaKnown RBP9.99□□□□□ -0.81
BRCA1-213ENST00000476777 MYNNQ9NPC7 610 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 PMF1-BGLAPU3KQ54 211 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
BRCA1-213ENST00000476777 A0A1W2PNR3 127 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 A0A1W2PR80 420 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 KIF2AO00139 706 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-213ENST00000476777 SCDO00767 359 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 SMAD9O15198 467 aaKnown RBP9.98□□□□□ -0.81
BRCA1-213ENST00000476777 OIP5O43482 229 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 CYTIPO60759 359 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 ACP2P11117 423 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 EGR1P18146 543 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 HMOX2P30519 316 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 LCN1P31025 176 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 CAV1Q03135 178 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 CHRNEQ04844 493 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 HSPB3Q12988 150 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 TOMM34Q15785 309 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-213ENST00000476777 BHLHB9Q6PI77 547 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 CBLN3Q6UW01 205 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 ZDHHC24Q6UX98 284 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 GALNT5Q7Z7M9 940 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF100Q8IYN0 542 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms