RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZDHHC18Q9NUE0 388 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 MTCH1Q9NZJ7 389 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 LNPEPQ9UIQ6 1025 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 STARD10Q9Y365 291 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 BZW2Q9Y6E2 419 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NUP153P49790 1475 aaKnown RBP3.59□□□□□ -1.84
VPS13D-207ENST00000476169 EPRSP07814 1512 aaKnown RBP3.59□□□□□ -1.84
VPS13D-207ENST00000476169 KIAA0556O60303 1618 aa3.59□□□□□ -1.84
VPS13D-207ENST00000476169 ADCY10Q96PN6 1610 aa3.59□□□□□ -1.84
VPS13D-207ENST00000476169 K7ERQ8 282 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TRDMT1O14717 391 aaKnown RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 YKT6O15498 198 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TAPBPO15533 448 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 OR2J3O76001 311 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 SERPIND1P05546 499 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CRYGCP07315 174 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CD1DP15813 335 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 SRMP19623 302 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 AOC1P19801 751 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PRKACBP22694 351 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 GNA11P29992 359 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 HMOX2P30519 316 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CDH5P33151 784 aaPredicted RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CRYBB2P43320 205 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 UQCRFS1P47985 274 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PGFP49763 221 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 RPS27AP62979 156 aaKnown RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 GSTO1P78417 241 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 DHODHQ02127 395 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PPIL2Q13356 520 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ILKQ13418 452 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CRMP1Q14194 572 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 STK38Q15208 465 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TAB1Q15750 504 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 KLHL38Q2WGJ6 581 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 HNRNPA1L2Q32P51 320 aaKnown RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 NKAIN1Q4KMZ8 207 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CYBRD1Q53TN4 286 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 LIN9Q5TKA1 542 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ZNF324BQ6AW86 544 aaPredicted RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PRR5LQ6MZQ0 368 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 APOOLQ6UXV4 268 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 HSDL2Q6YN16 418 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 MOB2Q70IA6 237 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 MTURNQ8N3F0 131 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 RAB42Q8N4Z0 105 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CSGALNACT2Q8N6G5 542 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 OR2T11Q8NH01 316 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TBCKQ8TEA7 893 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 GATAD1Q8WUU5 269 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ZNRF4Q8WWF5 429 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 FCAMRQ8WWV6 532 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 RAB3CQ96E17 227 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 C12orf42Q96LP6 360 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ZNF578Q96N58 590 aaPredicted RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TNFRSF13CQ96RJ3 184 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 OVOL2Q9BRP0 275 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PITPNM3Q9BZ71 974 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 MRPL37Q9BZE1 423 aaKnown RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 SLC7A5P2Q9GIP4 190 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 IKZF5Q9H5V7 419 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TDRD3Q9H7E2 651 aaKnown RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ELL3Q9HB65 397 aaPredicted RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ADGRL4Q9HBW9 690 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 NT5MQ9NPB1 228 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ESM1Q9NQ30 184 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PXMP2Q9NR77 195 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 RCOR3Q9P2K3 495 aaPredicted RBP3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ZNF221Q9UK13 617 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 OARD1Q9Y530 152 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 TMEM94Q12767 1356 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 PNPLA6Q8IY17 1366 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 MAPKBP1O60336 1514 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 ABCA8O94911 1581 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 CUL7Q14999 1698 aa3.58□□□□□ -1.84
VPS13D-207ENST00000476169 IQCMA0A1B0GVH7 501 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 SMCO2A6NFE2 343 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 PRR23D1E9PI22 279 aaPredicted RBP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 C11orf98E9PRG8 122 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 F5H6K3 240 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 P2RY10O00398 339 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 DLGAP1O14490 977 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 BCKDKO14874 412 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 GRIN2DO15399 1336 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 BUB3O43684 328 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 SH3BGRLO75368 114 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 JCHAINP01591 159 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 SP1P08047 785 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 PRR23D2P0DMB1 279 aaPredicted RBP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 GSTM3P21266 225 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 U2AF2P26368 475 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 STK19P49842 368 aaPredicted RBP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 DUSP3P51452 185 aaPredicted RBP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 DAOAP59103 153 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 YWHAGP61981 247 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13D-207ENST00000476169 KLRC3Q07444 240 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 ITPK1Q13572 414 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 FRMPD4Q14CM0 1322 aa3.57□□□□□ -1.84
VPS13D-207ENST00000476169 MRPL23Q16540 153 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms