RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SLCO4A1Q96BD0 722 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 C16orf58Q96GQ5 468 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 DOHHQ9BU89 302 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 BDH2Q9BUT1 245 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 TP63Q9H3D4 680 aaPredicted RBP14.26□□□□□ -0.13
CPSF3-203ENST00000475482 ZNF703Q9H7S9 590 aaPredicted RBP14.26□□□□□ -0.13
CPSF3-203ENST00000475482 ZFP64Q9NPA5 681 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 POLE3Q9NRF9 147 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 QPCTLQ9NXS2 382 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 DTX4Q9Y2E6 619 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 NPFFR2Q9Y5X5 522 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 FBN2P35556 2912 aa14.26□□□□□ -0.13
CPSF3-203ENST00000475482 ARHGAP21Q5T5U3 1957 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 M0QX08 132 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 HCN1O60741 890 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 TRIM3O75382 744 aaPredicted RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 DEAF1O75398 565 aaPredicted RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 RFPL3SP0C7P2 107 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 NAGAP17050 411 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 VHLP40337 213 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 PTDSS1P48651 473 aaKnown RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 SLC10A1Q14973 349 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 EXOSC7Q15024 291 aaKnown RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 ARHGAP11BQ3KRB8 267 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 GXYLT1Q4G148 440 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 PRAMEF20Q5VT98 475 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 HEPHL1Q6MZM0 1159 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 TMEM81Q6P7N7 255 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 ARMC8Q8IUR7 673 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 COX18Q8N8Q8 333 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 SIMC1Q8NDZ2 872 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 SPPL2AQ8TCT8 520 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 GPR151Q8TDV0 419 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 TREX2Q9BQ50 279 aaPredicted RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 LMF2Q9BU23 707 aaKnown RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 CHID1Q9BWS9 393 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
CPSF3-203ENST00000475482 VCXQ9H320 206 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 ANKRA2Q9H9E1 313 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 ACKR4Q9NPB9 350 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 V9GYQ6 96 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 DCHS2Q6V1P9 2916 aa14.25□□□□□ -0.13
CPSF3-203ENST00000475482 NPIPA2E9PIF3 369 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 NPIPA3F8WFD2 350 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 BCKDKO14874 412 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 CASQ2O14958 399 aaPredicted RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 TIPRLO75663 272 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 NKX2-2O95096 273 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 ITGA2P17301 1181 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 ENDOUP21128 410 aaKnown RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 ABCD3P28288 659 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 EMDP50402 254 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 DCAF7P61962 342 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 PSPHP78330 225 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 SYPL1Q16563 259 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 IFI44LQ53G44 452 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 EXOSC6Q5RKV6 272 aaKnown RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 FNDC7Q5VTL7 733 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 HLA-DQA1Q5Y7H0 255 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 TMEM211Q6ICI0 200 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 ENPP6Q6UWR7 440 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 RPRMLQ8N4K4 120 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 SLC16A11Q8NCK7 471 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 CHDHQ8NE62 594 aaPredicted RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 HOXB13Q92826 284 aaPredicted RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 CDS1Q92903 461 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 SLC35A4Q96G79 324 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 CENPNQ96H22 339 aaPredicted RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 TPD52L3Q96J77 140 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 HSH2DQ96JZ2 352 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 ANGPTL4Q9BY76 406 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 FOLH1BQ9HBA9 442 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 Q9N2J8 555 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 C8orf4Q9NR00 106 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 PNPLA3Q9NST1 481 aa14.24□□□□□ -0.13
CPSF3-203ENST00000475482 BOKQ9UMX3 212 aaPredicted RBP14.24□□□□□ -0.13
CPSF3-203ENST00000475482 CSMD1Q96PZ7 3565 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 C19orf84I3L1E1 186 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 TP53I11O14683 189 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 TO15178 435 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 STX11O75558 287 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 H6PDO95479 791 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 FABP3P05413 133 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 GUSBP08236 651 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 ACP2P11117 423 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 GABRA3P34903 492 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 PTGER4P35408 488 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 MAP3K8P41279 467 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 TMED10P49755 219 aaKnown RBP14.23□□□□□ -0.13
CPSF3-203ENST00000475482 NRG3P56975 720 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 FBXW4P57775 412 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 POU6F2P78424 691 aaPredicted RBP14.23□□□□□ -0.13
CPSF3-203ENST00000475482 TRIP10Q15642 601 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 ATP6AP1Q15904 470 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 DUSP5Q16690 384 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 ANKFN1Q8N957 763 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 GEMIN6Q8WXD5 167 aaKnown RBP14.23□□□□□ -0.13
CPSF3-203ENST00000475482 LRTOMTQ8WZ04 291 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 PROX1Q92786 737 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 HSPBAP1Q96EW2 488 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms