RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NPAS1Q99742 590 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 FUT8Q9BYC5 575 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 TSPYL1Q9H0U9 437 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 NINJ2Q9NZG7 142 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 ZNF180Q9UJW8 692 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 GPC6Q9Y625 555 aaPredicted RBP11.15□□□□□ -0.62
SKA3-206ENST00000475251 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 TRIM49D1C9J1S8 452 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 H3BNH8 94 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 H3BQF6 201 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 H7C417 338 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 ZNF195O14628 629 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 PDPK1O15530 556 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 RSL1D1O76021 490 aaKnown RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 KCNK2O95069 426 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 NTN1O95631 604 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 ALOX5P09917 674 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 USF1P22415 310 aaPredicted RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 ATP5F1P24539 256 aaPredicted RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 SLC7A1P30825 629 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 PRIM2P49643 509 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 PRKAG1P54619 331 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 RAC3P60763 192 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 SELENBP1Q13228 472 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 SQLEQ14534 574 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 TRADDQ15628 312 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 PRSS53Q2L4Q9 553 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 TMEM176BQ3YBM2 270 aaPredicted RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 FAM166AQ6J272 317 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 SLC22A25Q6T423 547 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 ZNF525Q8N782 197 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 ZNF527Q8NB42 609 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 ANKK1Q8NFD2 765 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 FAM110BQ8TC76 370 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 METTL2AQ96IZ6 378 aaKnown RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 PSD2Q9BQI7 771 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 HOXD1Q9GZZ0 328 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 MANSC1Q9H8J5 431 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 RRAGDQ9NQL2 400 aaPredicted RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 POLR3HQ9Y535 204 aaPredicted RBP11.14□□□□□ -0.63
SKA3-206ENST00000475251 TIMM22Q9Y584 194 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
SKA3-206ENST00000475251 OR5H1A6NKK0 313 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 ZNF724A8MTY0 619 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 PGM3O95394 542 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 SNRPAP09012 282 aaKnown RBP11.13□□□□□ -0.63
SKA3-206ENST00000475251 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 COX5AP20674 150 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 ATP6V1C1P21283 382 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 SHC1P29353 583 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 P2RX1P51575 399 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 NAA20P61599 178 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 CHRNB3Q05901 458 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 RASGEF1BQ0VAM2 473 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 FAM219BQ5XKK7 198 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 ZNF544Q6NX49 715 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 NOXRED1Q6NXP6 359 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 ZNF551Q7Z340 670 aaPredicted RBP11.13□□□□□ -0.63
SKA3-206ENST00000475251 ZNF100Q8IYN0 542 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 COX18Q8N8Q8 333 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 NUP43Q8NFH3 380 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 FBXO27Q8NI29 283 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 PHOSPHO1Q8TCT1 267 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 L3HYPDHQ96EM0 354 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 ZNF764Q96H86 408 aaPredicted RBP11.13□□□□□ -0.63
SKA3-206ENST00000475251 MRGPRX4Q96LA9 322 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 COQ10BQ9H8M1 238 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 MID1IP1Q9NPA3 183 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 NTMQ9P121 344 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 PRSS50Q9UI38 385 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
SKA3-206ENST00000475251 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 E7EQL1 145 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 POC1B-GALNT4F8VUJ3 575 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 NDUFS8O00217 210 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 CYTIPO60759 359 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 CRCPO75575 148 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 ACP2P11117 423 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 DDX5P17844 614 aaKnown RBP11.12□□□□□ -0.63
SKA3-206ENST00000475251 PTNP21246 168 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 ENPP1P22413 925 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 IGHV1-2P23083 117 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 FABP6P51161 128 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 EFNA4P52798 201 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 PRKAA2P54646 552 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 POU6F2P78424 691 aaPredicted RBP11.12□□□□□ -0.63
SKA3-206ENST00000475251 ZNF117Q03924 483 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 CD226Q15762 336 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 TRIM46Q7Z4K8 759 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 GALNT5Q7Z7M9 940 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 SLC16A11Q8NCK7 471 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 JADE3Q92613 823 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 PPCDCQ96CD2 204 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 CCDC126Q96EE4 140 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms